Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SCN2BO60939 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SCN2BO60939 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SCN2BO60939 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SCN2BO60939 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.07□□□□□ -0.16
SCN2BO60939 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.07□□□□□ -0.16
SCN2BO60939 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.07□□□□□ -0.16
SCN2BO60939 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SCN2BO60939 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SCN2BO60939 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SCN2BO60939 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SCN2BO60939 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SCN2BO60939 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SCN2BO60939 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SCN2BO60939 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SCN2BO60939 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.07□□□□□ -0.16
SCN2BO60939 AL136172.1-201ENST00000598590 1394 ntBASIC14.07□□□□□ -0.16
SCN2BO60939 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SCN2BO60939 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.07□□□□□ -0.16
SCN2BO60939 AL359881.3-201ENST00000602640 1721 ntBASIC14.07□□□□□ -0.16
SCN2BO60939 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.07□□□□□ -0.16
SCN2BO60939 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.07□□□□□ -0.16
SCN2BO60939 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.06□□□□□ -0.16
SCN2BO60939 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SCN2BO60939 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.06□□□□□ -0.16
SCN2BO60939 AC010327.5-201ENST00000586923 3061 ntBASIC14.06□□□□□ -0.16
SCN2BO60939 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SCN2BO60939 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SCN2BO60939 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SCN2BO60939 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SCN2BO60939 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SCN2BO60939 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SCN2BO60939 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SCN2BO60939 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SCN2BO60939 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.06□□□□□ -0.16
SCN2BO60939 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.06□□□□□ -0.16
SCN2BO60939 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SCN2BO60939 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.06□□□□□ -0.16
SCN2BO60939 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SCN2BO60939 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SCN2BO60939 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SCN2BO60939 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.06□□□□□ -0.16
SCN2BO60939 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SCN2BO60939 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SCN2BO60939 MIR661-201ENST00000384842 89 ntBASIC14.06□□□□□ -0.16
SCN2BO60939 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SCN2BO60939 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SCN2BO60939 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SCN2BO60939 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SCN2BO60939 FO681548.1-201ENST00000455617 1132 ntBASIC14.06□□□□□ -0.16
SCN2BO60939 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.06□□□□□ -0.16
SCN2BO60939 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.06□□□□□ -0.16
SCN2BO60939 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SCN2BO60939 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.06□□□□□ -0.16
SCN2BO60939 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.06□□□□□ -0.16
SCN2BO60939 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.06□□□□□ -0.16
SCN2BO60939 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.06□□□□□ -0.16
SCN2BO60939 MIR6074-201ENST00000612054 107 ntBASIC14.06□□□□□ -0.16
SCN2BO60939 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
SCN2BO60939 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SCN2BO60939 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
SCN2BO60939 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.06□□□□□ -0.16
SCN2BO60939 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SCN2BO60939 KRT8P35-201ENST00000483942 1338 ntBASIC14.06□□□□□ -0.16
SCN2BO60939 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.06□□□□□ -0.16
SCN2BO60939 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SCN2BO60939 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SCN2BO60939 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.06□□□□□ -0.16
SCN2BO60939 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SCN2BO60939 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SCN2BO60939 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SCN2BO60939 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SCN2BO60939 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SCN2BO60939 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SCN2BO60939 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SCN2BO60939 AC007541.1-201ENST00000570282 1469 ntBASIC14.06□□□□□ -0.16
SCN2BO60939 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SCN2BO60939 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SCN2BO60939 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SCN2BO60939 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.05□□□□□ -0.16
SCN2BO60939 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SCN2BO60939 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.05□□□□□ -0.16
SCN2BO60939 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SCN2BO60939 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
SCN2BO60939 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.05□□□□□ -0.16
SCN2BO60939 AC138969.2-201ENST00000532739 9932 ntBASIC14.05□□□□□ -0.16
SCN2BO60939 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SCN2BO60939 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SCN2BO60939 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SCN2BO60939 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SCN2BO60939 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SCN2BO60939 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SCN2BO60939 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.05□□□□□ -0.16
SCN2BO60939 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SCN2BO60939 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SCN2BO60939 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SCN2BO60939 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
SCN2BO60939 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.05□□□□□ -0.16
SCN2BO60939 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.05□□□□□ -0.16
SCN2BO60939 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms