Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
PRAMEF11O60813 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
PRAMEF11O60813 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.96□□□□□ -0.02
PRAMEF11O60813 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
PRAMEF11O60813 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
PRAMEF11O60813 BX640514.1-201ENST00000583223 1918 ntBASIC14.96□□□□□ -0.02
PRAMEF11O60813 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
PRAMEF11O60813 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
PRAMEF11O60813 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.95□□□□□ -0.02
PRAMEF11O60813 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.95□□□□□ -0.02
PRAMEF11O60813 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PRAMEF11O60813 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PRAMEF11O60813 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PRAMEF11O60813 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PRAMEF11O60813 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.95□□□□□ -0.02
PRAMEF11O60813 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
PRAMEF11O60813 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.95□□□□□ -0.02
PRAMEF11O60813 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.95□□□□□ -0.02
PRAMEF11O60813 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.95□□□□□ -0.02
PRAMEF11O60813 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.95□□□□□ -0.02
PRAMEF11O60813 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PRAMEF11O60813 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PRAMEF11O60813 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PRAMEF11O60813 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC14.95□□□□□ -0.02
PRAMEF11O60813 POM121L10P-201ENST00000436994 1285 ntBASIC14.95□□□□□ -0.02
PRAMEF11O60813 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PRAMEF11O60813 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC14.95□□□□□ -0.02
PRAMEF11O60813 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
PRAMEF11O60813 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PRAMEF11O60813 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.95□□□□□ -0.02
PRAMEF11O60813 FAM8A2P-201ENST00000528813 1142 ntBASIC14.95□□□□□ -0.02
PRAMEF11O60813 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.95□□□□□ -0.02
PRAMEF11O60813 SORD2P-201ENST00000558556 1069 ntBASIC14.95□□□□□ -0.02
PRAMEF11O60813 AC027237.1-201ENST00000560942 655 ntBASIC14.95□□□□□ -0.02
PRAMEF11O60813 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
PRAMEF11O60813 Z98259.2-201ENST00000641583 609 ntBASIC14.95□□□□□ -0.02
PRAMEF11O60813 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
PRAMEF11O60813 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PRAMEF11O60813 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PRAMEF11O60813 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PRAMEF11O60813 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
PRAMEF11O60813 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PRAMEF11O60813 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PRAMEF11O60813 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PRAMEF11O60813 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PRAMEF11O60813 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PRAMEF11O60813 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PRAMEF11O60813 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PRAMEF11O60813 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.95□□□□□ -0.02
PRAMEF11O60813 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PRAMEF11O60813 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.95□□□□□ -0.02
PRAMEF11O60813 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
PRAMEF11O60813 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC14.95□□□□□ -0.02
PRAMEF11O60813 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC14.95□□□□□ -0.02
PRAMEF11O60813 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
PRAMEF11O60813 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PRAMEF11O60813 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
PRAMEF11O60813 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PRAMEF11O60813 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
PRAMEF11O60813 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PRAMEF11O60813 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PRAMEF11O60813 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
PRAMEF11O60813 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
PRAMEF11O60813 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PRAMEF11O60813 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
PRAMEF11O60813 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
PRAMEF11O60813 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PRAMEF11O60813 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PRAMEF11O60813 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.94□□□□□ -0.02
PRAMEF11O60813 TMBIM7P-202ENST00000641474 1516 ntBASIC14.94□□□□□ -0.02
PRAMEF11O60813 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PRAMEF11O60813 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
PRAMEF11O60813 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PRAMEF11O60813 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PRAMEF11O60813 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PRAMEF11O60813 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PRAMEF11O60813 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
PRAMEF11O60813 SMS-201ENST00000379404 1174 ntTSL 3 BASIC14.94□□□□□ -0.02
PRAMEF11O60813 AC012441.2-201ENST00000444843 739 ntBASIC14.94□□□□□ -0.02
PRAMEF11O60813 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC14.94□□□□□ -0.02
PRAMEF11O60813 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC14.94□□□□□ -0.02
PRAMEF11O60813 TUBB8P8-201ENST00000458717 1058 ntBASIC14.94□□□□□ -0.02
PRAMEF11O60813 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC14.94□□□□□ -0.02
PRAMEF11O60813 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14.94□□□□□ -0.02
PRAMEF11O60813 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
PRAMEF11O60813 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PRAMEF11O60813 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.94□□□□□ -0.02
PRAMEF11O60813 ABBA01031663.1-201ENST00000635630 790 ntBASIC14.94□□□□□ -0.02
PRAMEF11O60813 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PRAMEF11O60813 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PRAMEF11O60813 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PRAMEF11O60813 KRT8P29-201ENST00000420409 1371 ntBASIC14.94□□□□□ -0.02
PRAMEF11O60813 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PRAMEF11O60813 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PRAMEF11O60813 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
PRAMEF11O60813 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
PRAMEF11O60813 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PRAMEF11O60813 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
PRAMEF11O60813 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC14.94□□□□□ -0.02
PRAMEF11O60813 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms