Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
XRCC2O43543 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
XRCC2O43543 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC12.93□□□□□ -0.34
XRCC2O43543 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
XRCC2O43543 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
XRCC2O43543 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
XRCC2O43543 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
XRCC2O43543 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
XRCC2O43543 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.93□□□□□ -0.34
XRCC2O43543 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
XRCC2O43543 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC12.93□□□□□ -0.34
XRCC2O43543 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
XRCC2O43543 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC12.93□□□□□ -0.34
XRCC2O43543 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC12.93□□□□□ -0.34
XRCC2O43543 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
XRCC2O43543 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
XRCC2O43543 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC12.93□□□□□ -0.34
XRCC2O43543 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
XRCC2O43543 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.93□□□□□ -0.34
XRCC2O43543 MX1-218ENST00000619682 1980 ntTSL 5 BASIC12.93□□□□□ -0.34
XRCC2O43543 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
XRCC2O43543 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
XRCC2O43543 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
XRCC2O43543 MGST3-203ENST00000367885 680 ntTSL 2 BASIC12.93□□□□□ -0.34
XRCC2O43543 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
XRCC2O43543 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
XRCC2O43543 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
XRCC2O43543 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
XRCC2O43543 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
XRCC2O43543 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
XRCC2O43543 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC12.93□□□□□ -0.34
XRCC2O43543 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
XRCC2O43543 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC12.93□□□□□ -0.34
XRCC2O43543 AL355864.2-201ENST00000447420 863 ntBASIC12.93□□□□□ -0.34
XRCC2O43543 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC12.93□□□□□ -0.34
XRCC2O43543 RN7SL48P-201ENST00000579283 293 ntBASIC12.93□□□□□ -0.34
XRCC2O43543 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC12.93□□□□□ -0.34
XRCC2O43543 AC010319.3-201ENST00000597028 470 ntBASIC12.93□□□□□ -0.34
XRCC2O43543 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
XRCC2O43543 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC12.93□□□□□ -0.34
XRCC2O43543 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
XRCC2O43543 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.93□□□□□ -0.34
XRCC2O43543 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC12.93□□□□□ -0.34
XRCC2O43543 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
XRCC2O43543 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC12.93□□□□□ -0.34
XRCC2O43543 FOS-202ENST00000535987 1402 ntTSL 2 BASIC12.93□□□□□ -0.34
XRCC2O43543 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
XRCC2O43543 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
XRCC2O43543 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
XRCC2O43543 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
XRCC2O43543 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
XRCC2O43543 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC12.93□□□□□ -0.34
XRCC2O43543 AGGF1P1-201ENST00000509500 2073 ntBASIC12.93□□□□□ -0.34
XRCC2O43543 MVK-214ENST00000629016 1591 ntTSL 5 BASIC12.93□□□□□ -0.34
XRCC2O43543 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC12.93□□□□□ -0.34
XRCC2O43543 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
XRCC2O43543 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
XRCC2O43543 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
XRCC2O43543 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
XRCC2O43543 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
XRCC2O43543 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
XRCC2O43543 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
XRCC2O43543 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
XRCC2O43543 AL136172.1-201ENST00000598590 1394 ntBASIC12.93□□□□□ -0.34
XRCC2O43543 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
XRCC2O43543 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
XRCC2O43543 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
XRCC2O43543 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC12.93□□□□□ -0.34
XRCC2O43543 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC12.92□□□□□ -0.34
XRCC2O43543 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
XRCC2O43543 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
XRCC2O43543 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
XRCC2O43543 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
XRCC2O43543 AL138725.1-201ENST00000407347 1314 ntBASIC12.92□□□□□ -0.34
XRCC2O43543 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
XRCC2O43543 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
XRCC2O43543 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
XRCC2O43543 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
XRCC2O43543 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
XRCC2O43543 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC12.92□□□□□ -0.34
XRCC2O43543 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
XRCC2O43543 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
XRCC2O43543 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
XRCC2O43543 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
XRCC2O43543 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
XRCC2O43543 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
XRCC2O43543 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
XRCC2O43543 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
XRCC2O43543 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
XRCC2O43543 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC12.92□□□□□ -0.34
XRCC2O43543 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
XRCC2O43543 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
XRCC2O43543 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC12.92□□□□□ -0.34
XRCC2O43543 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC12.92□□□□□ -0.34
XRCC2O43543 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC12.92□□□□□ -0.34
XRCC2O43543 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
XRCC2O43543 RN7SL752P-201ENST00000463779 287 ntBASIC12.92□□□□□ -0.34
XRCC2O43543 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
XRCC2O43543 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC12.92□□□□□ -0.34
XRCC2O43543 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms