Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC12.72□□□□□ -0.37
TMEM235A6NFC5 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TMEM235A6NFC5 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TMEM235A6NFC5 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TMEM235A6NFC5 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
TMEM235A6NFC5 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.72□□□□□ -0.37
TMEM235A6NFC5 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
TMEM235A6NFC5 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TMEM235A6NFC5 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TMEM235A6NFC5 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TMEM235A6NFC5 USP31-203ENST00000567975 2142 ntTSL 2 BASIC12.71□□□□□ -0.37
TMEM235A6NFC5 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TMEM235A6NFC5 AC111170.3-201ENST00000624282 2464 ntBASIC12.71□□□□□ -0.37
TMEM235A6NFC5 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TMEM235A6NFC5 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
TMEM235A6NFC5 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
TMEM235A6NFC5 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC12.71□□□□□ -0.37
TMEM235A6NFC5 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TMEM235A6NFC5 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TMEM235A6NFC5 TP73-211ENST00000604074 4806 ntTSL 5 BASIC12.71□□□□□ -0.37
TMEM235A6NFC5 RERG-209ENST00000546331 1383 ntTSL 2 BASIC12.71□□□□□ -0.37
TMEM235A6NFC5 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TMEM235A6NFC5 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TMEM235A6NFC5 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TMEM235A6NFC5 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
TMEM235A6NFC5 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC12.71□□□□□ -0.37
TMEM235A6NFC5 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TMEM235A6NFC5 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.71□□□□□ -0.37
TMEM235A6NFC5 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TMEM235A6NFC5 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
TMEM235A6NFC5 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
TMEM235A6NFC5 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TMEM235A6NFC5 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TMEM235A6NFC5 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC12.71□□□□□ -0.37
TMEM235A6NFC5 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC12.71□□□□□ -0.37
TMEM235A6NFC5 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TMEM235A6NFC5 HLA-V-204ENST00000476601 1289 ntBASIC12.71□□□□□ -0.37
TMEM235A6NFC5 GAPDHP40-201ENST00000505218 1006 ntBASIC12.71□□□□□ -0.37
TMEM235A6NFC5 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC12.71□□□□□ -0.37
TMEM235A6NFC5 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC12.71□□□□□ -0.37
TMEM235A6NFC5 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC12.71□□□□□ -0.37
TMEM235A6NFC5 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC12.71□□□□□ -0.37
TMEM235A6NFC5 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC12.71□□□□□ -0.37
TMEM235A6NFC5 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TMEM235A6NFC5 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
TMEM235A6NFC5 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TMEM235A6NFC5 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TMEM235A6NFC5 WARS-203ENST00000358655 2466 ntTSL 2 BASIC12.71□□□□□ -0.37
TMEM235A6NFC5 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
TMEM235A6NFC5 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
TMEM235A6NFC5 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
TMEM235A6NFC5 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TMEM235A6NFC5 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TMEM235A6NFC5 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
TMEM235A6NFC5 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC12.71□□□□□ -0.38
TMEM235A6NFC5 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12.71□□□□□ -0.38
TMEM235A6NFC5 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
TMEM235A6NFC5 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
TMEM235A6NFC5 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TMEM235A6NFC5 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
TMEM235A6NFC5 CR383656.2-201ENST00000548656 2254 ntBASIC12.71□□□□□ -0.38
TMEM235A6NFC5 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TMEM235A6NFC5 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC12.7□□□□□ -0.38
TMEM235A6NFC5 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TMEM235A6NFC5 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TMEM235A6NFC5 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
TMEM235A6NFC5 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TMEM235A6NFC5 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TMEM235A6NFC5 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC12.7□□□□□ -0.38
TMEM235A6NFC5 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC12.7□□□□□ -0.38
TMEM235A6NFC5 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TMEM235A6NFC5 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC12.7□□□□□ -0.38
TMEM235A6NFC5 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TMEM235A6NFC5 MEX3B-202ENST00000558133 4333 ntBASIC12.7□□□□□ -0.38
TMEM235A6NFC5 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
TMEM235A6NFC5 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TMEM235A6NFC5 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TMEM235A6NFC5 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
TMEM235A6NFC5 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TMEM235A6NFC5 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC12.7□□□□□ -0.38
TMEM235A6NFC5 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
TMEM235A6NFC5 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC12.7□□□□□ -0.38
TMEM235A6NFC5 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TMEM235A6NFC5 AC004899.2-201ENST00000622993 3860 ntBASIC12.7□□□□□ -0.38
TMEM235A6NFC5 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TMEM235A6NFC5 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TMEM235A6NFC5 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC12.7□□□□□ -0.38
TMEM235A6NFC5 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TMEM235A6NFC5 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC12.7□□□□□ -0.38
TMEM235A6NFC5 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC12.7□□□□□ -0.38
TMEM235A6NFC5 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TMEM235A6NFC5 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TMEM235A6NFC5 AL353779.1-201ENST00000434793 351 ntBASIC12.7□□□□□ -0.38
TMEM235A6NFC5 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
TMEM235A6NFC5 PPP6R2P1-201ENST00000450880 1275 ntBASIC12.7□□□□□ -0.38
TMEM235A6NFC5 YBX1P5-201ENST00000509441 847 ntBASIC12.7□□□□□ -0.38
TMEM235A6NFC5 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TMEM235A6NFC5 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC12.7□□□□□ -0.38
TMEM235A6NFC5 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TMEM235A6NFC5 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms