Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC13.35□□□□□ -0.27
PARPBPQ9NWS1 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PARPBPQ9NWS1 MESTP3-201ENST00000503460 968 ntBASIC13.35□□□□□ -0.27
PARPBPQ9NWS1 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.35□□□□□ -0.27
PARPBPQ9NWS1 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC13.35□□□□□ -0.27
PARPBPQ9NWS1 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.35□□□□□ -0.27
PARPBPQ9NWS1 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.35□□□□□ -0.27
PARPBPQ9NWS1 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.35□□□□□ -0.27
PARPBPQ9NWS1 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC13.35□□□□□ -0.27
PARPBPQ9NWS1 AC138951.2-201ENST00000623455 1161 ntBASIC13.35□□□□□ -0.27
PARPBPQ9NWS1 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.35□□□□□ -0.27
PARPBPQ9NWS1 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.35□□□□□ -0.27
PARPBPQ9NWS1 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
PARPBPQ9NWS1 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PARPBPQ9NWS1 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
PARPBPQ9NWS1 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.35□□□□□ -0.27
PARPBPQ9NWS1 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.35□□□□□ -0.27
PARPBPQ9NWS1 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.35□□□□□ -0.27
PARPBPQ9NWS1 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.35□□□□□ -0.27
PARPBPQ9NWS1 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.35□□□□□ -0.27
PARPBPQ9NWS1 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PARPBPQ9NWS1 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
PARPBPQ9NWS1 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PARPBPQ9NWS1 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.35□□□□□ -0.27
PARPBPQ9NWS1 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.35□□□□□ -0.27
PARPBPQ9NWS1 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.35□□□□□ -0.27
PARPBPQ9NWS1 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
PARPBPQ9NWS1 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PARPBPQ9NWS1 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PARPBPQ9NWS1 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
PARPBPQ9NWS1 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PARPBPQ9NWS1 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
PARPBPQ9NWS1 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
PARPBPQ9NWS1 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
PARPBPQ9NWS1 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PARPBPQ9NWS1 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.34□□□□□ -0.27
PARPBPQ9NWS1 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.34□□□□□ -0.27
PARPBPQ9NWS1 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.34□□□□□ -0.27
PARPBPQ9NWS1 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.34□□□□□ -0.27
PARPBPQ9NWS1 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.34□□□□□ -0.27
PARPBPQ9NWS1 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PARPBPQ9NWS1 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.34□□□□□ -0.27
PARPBPQ9NWS1 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
PARPBPQ9NWS1 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.34□□□□□ -0.27
PARPBPQ9NWS1 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PARPBPQ9NWS1 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PARPBPQ9NWS1 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PARPBPQ9NWS1 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
PARPBPQ9NWS1 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.34□□□□□ -0.27
PARPBPQ9NWS1 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PARPBPQ9NWS1 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PARPBPQ9NWS1 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
PARPBPQ9NWS1 AC023908.3-201ENST00000564211 3047 ntBASIC13.34□□□□□ -0.27
PARPBPQ9NWS1 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PARPBPQ9NWS1 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PARPBPQ9NWS1 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PARPBPQ9NWS1 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PARPBPQ9NWS1 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
PARPBPQ9NWS1 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PARPBPQ9NWS1 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
PARPBPQ9NWS1 AC079776.1-201ENST00000401540 1152 ntBASIC13.34□□□□□ -0.27
PARPBPQ9NWS1 POM121L8P-201ENST00000417732 1281 ntBASIC13.34□□□□□ -0.27
PARPBPQ9NWS1 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PARPBPQ9NWS1 FAM8A4P-201ENST00000435433 1213 ntBASIC13.34□□□□□ -0.27
PARPBPQ9NWS1 POM121L9P-203ENST00000441984 1285 ntBASIC13.34□□□□□ -0.27
PARPBPQ9NWS1 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PARPBPQ9NWS1 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC13.34□□□□□ -0.27
PARPBPQ9NWS1 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC13.34□□□□□ -0.27
PARPBPQ9NWS1 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.34□□□□□ -0.27
PARPBPQ9NWS1 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PARPBPQ9NWS1 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.34□□□□□ -0.27
PARPBPQ9NWS1 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
PARPBPQ9NWS1 AC244669.2-201ENST00000612320 853 ntBASIC13.34□□□□□ -0.27
PARPBPQ9NWS1 AC133552.6-201ENST00000613406 534 ntBASIC13.34□□□□□ -0.27
PARPBPQ9NWS1 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PARPBPQ9NWS1 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PARPBPQ9NWS1 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
PARPBPQ9NWS1 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
PARPBPQ9NWS1 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC13.34□□□□□ -0.27
PARPBPQ9NWS1 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PARPBPQ9NWS1 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PARPBPQ9NWS1 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
PARPBPQ9NWS1 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PARPBPQ9NWS1 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
PARPBPQ9NWS1 AHCYP2-201ENST00000430630 1300 ntBASIC13.34□□□□□ -0.27
PARPBPQ9NWS1 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PARPBPQ9NWS1 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.34□□□□□ -0.27
PARPBPQ9NWS1 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PARPBPQ9NWS1 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
PARPBPQ9NWS1 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PARPBPQ9NWS1 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PARPBPQ9NWS1 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
PARPBPQ9NWS1 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.27
PARPBPQ9NWS1 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.27
PARPBPQ9NWS1 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.33□□□□□ -0.27
PARPBPQ9NWS1 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.33□□□□□ -0.27
PARPBPQ9NWS1 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
PARPBPQ9NWS1 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
PARPBPQ9NWS1 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PARPBPQ9NWS1 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms