Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTN4Q9NQC3 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.76■□□□□ 0.43
RTN4Q9NQC3 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTN4Q9NQC3 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTN4Q9NQC3 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC17.76■□□□□ 0.43
RTN4Q9NQC3 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTN4Q9NQC3 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTN4Q9NQC3 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTN4Q9NQC3 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RTN4Q9NQC3 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTN4Q9NQC3 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTN4Q9NQC3 MAGED1-201ENST00000326587 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTN4Q9NQC3 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RTN4Q9NQC3 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.76■□□□□ 0.43
RTN4Q9NQC3 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.76■□□□□ 0.43
RTN4Q9NQC3 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTN4Q9NQC3 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RTN4Q9NQC3 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
RTN4Q9NQC3 FCAR-203ENST00000355524 1483 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTN4Q9NQC3 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.75■□□□□ 0.43
RTN4Q9NQC3 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTN4Q9NQC3 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
RTN4Q9NQC3 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC17.75■□□□□ 0.43
RTN4Q9NQC3 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTN4Q9NQC3 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTN4Q9NQC3 PCDHB4-201ENST00000194152 3825 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
RTN4Q9NQC3 ARFIP2-210ENST00000614314 3846 ntTSL 2 BASIC17.75■□□□□ 0.43
RTN4Q9NQC3 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
RTN4Q9NQC3 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RTN4Q9NQC3 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
RTN4Q9NQC3 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTN4Q9NQC3 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC17.75■□□□□ 0.43
RTN4Q9NQC3 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC17.75■□□□□ 0.43
RTN4Q9NQC3 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
RTN4Q9NQC3 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTN4Q9NQC3 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTN4Q9NQC3 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.75■□□□□ 0.43
RTN4Q9NQC3 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.75■□□□□ 0.43
RTN4Q9NQC3 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.75■□□□□ 0.43
RTN4Q9NQC3 AC046143.1-201ENST00000447139 972 ntTSL 2 BASIC17.75■□□□□ 0.43
RTN4Q9NQC3 AC092910.1-201ENST00000482027 1129 ntBASIC17.75■□□□□ 0.43
RTN4Q9NQC3 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.75■□□□□ 0.43
RTN4Q9NQC3 ZNF506-204ENST00000545006 1007 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RTN4Q9NQC3 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
RTN4Q9NQC3 AL009183.1-201ENST00000603760 355 ntBASIC17.75■□□□□ 0.43
RTN4Q9NQC3 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTN4Q9NQC3 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC17.75■□□□□ 0.43
RTN4Q9NQC3 TNFRSF8-201ENST00000263932 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTN4Q9NQC3 TACC2-209ENST00000369004 3667 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RTN4Q9NQC3 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTN4Q9NQC3 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
RTN4Q9NQC3 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTN4Q9NQC3 PACSIN1-207ENST00000620693 4299 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTN4Q9NQC3 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC17.75■□□□□ 0.43
RTN4Q9NQC3 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
RTN4Q9NQC3 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTN4Q9NQC3 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC17.75■□□□□ 0.43
RTN4Q9NQC3 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.75■□□□□ 0.43
RTN4Q9NQC3 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTN4Q9NQC3 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RTN4Q9NQC3 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.75■□□□□ 0.43
RTN4Q9NQC3 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTN4Q9NQC3 L3MBTL1-203ENST00000373135 3218 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTN4Q9NQC3 OTOA-203ENST00000388957 2703 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
RTN4Q9NQC3 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
RTN4Q9NQC3 DGKZ-204ENST00000454345 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTN4Q9NQC3 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTN4Q9NQC3 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTN4Q9NQC3 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
RTN4Q9NQC3 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTN4Q9NQC3 PIM1-201ENST00000373509 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTN4Q9NQC3 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTN4Q9NQC3 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RTN4Q9NQC3 AL645608.3-201ENST00000448179 3043 ntTSL 2 BASIC17.74■□□□□ 0.43
RTN4Q9NQC3 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
RTN4Q9NQC3 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
RTN4Q9NQC3 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTN4Q9NQC3 AOC4P-203ENST00000566825 2289 ntBASIC17.74■□□□□ 0.43
RTN4Q9NQC3 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.74■□□□□ 0.43
RTN4Q9NQC3 ATXN2L-203ENST00000340394 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTN4Q9NQC3 LRTM1-201ENST00000273286 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTN4Q9NQC3 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.74■□□□□ 0.43
RTN4Q9NQC3 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTN4Q9NQC3 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTN4Q9NQC3 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTN4Q9NQC3 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTN4Q9NQC3 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
RTN4Q9NQC3 AC004241.1-201ENST00000547799 3299 ntTSL 5 BASIC17.74■□□□□ 0.43
RTN4Q9NQC3 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTN4Q9NQC3 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTN4Q9NQC3 DCUN1D2-AS-201ENST00000414992 330 ntTSL 3 BASIC17.74■□□□□ 0.43
RTN4Q9NQC3 AC092474.2-201ENST00000424288 719 ntBASIC17.74■□□□□ 0.43
RTN4Q9NQC3 AL358176.4-201ENST00000428891 675 ntTSL 2 BASIC17.74■□□□□ 0.43
RTN4Q9NQC3 GOSR1-204ENST00000451249 1231 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
RTN4Q9NQC3 TXK-203ENST00000507351 1153 ntTSL 2 BASIC17.74■□□□□ 0.43
RTN4Q9NQC3 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.74■□□□□ 0.43
RTN4Q9NQC3 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC17.74■□□□□ 0.43
RTN4Q9NQC3 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RTN4Q9NQC3 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.74■□□□□ 0.43
RTN4Q9NQC3 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms