Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SEC22CQ9BRL7 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SEC22CQ9BRL7 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SEC22CQ9BRL7 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SEC22CQ9BRL7 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SEC22CQ9BRL7 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SEC22CQ9BRL7 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SEC22CQ9BRL7 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC12.58□□□□□ -0.4
SEC22CQ9BRL7 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC12.58□□□□□ -0.4
SEC22CQ9BRL7 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC12.58□□□□□ -0.4
SEC22CQ9BRL7 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
SEC22CQ9BRL7 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC12.58□□□□□ -0.4
SEC22CQ9BRL7 CBR1-202ENST00000399191 838 ntTSL 3 BASIC12.58□□□□□ -0.4
SEC22CQ9BRL7 ANKZF1-202ENST00000409849 2155 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SEC22CQ9BRL7 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC12.58□□□□□ -0.4
SEC22CQ9BRL7 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC12.58□□□□□ -0.4
SEC22CQ9BRL7 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC12.58□□□□□ -0.4
SEC22CQ9BRL7 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC12.58□□□□□ -0.4
SEC22CQ9BRL7 AC091304.2-201ENST00000564639 760 ntBASIC12.58□□□□□ -0.4
SEC22CQ9BRL7 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC12.58□□□□□ -0.4
SEC22CQ9BRL7 TBCB-211ENST00000589996 724 ntTSL 3 BASIC12.58□□□□□ -0.4
SEC22CQ9BRL7 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
SEC22CQ9BRL7 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC12.58□□□□□ -0.4
SEC22CQ9BRL7 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SEC22CQ9BRL7 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
SEC22CQ9BRL7 AQP6-205ENST00000618286 829 ntTSL 5 BASIC12.58□□□□□ -0.4
SEC22CQ9BRL7 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC12.58□□□□□ -0.4
SEC22CQ9BRL7 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC12.58□□□□□ -0.4
SEC22CQ9BRL7 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
SEC22CQ9BRL7 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SEC22CQ9BRL7 AL358933.1-201ENST00000565046 2830 ntBASIC12.58□□□□□ -0.4
SEC22CQ9BRL7 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC12.58□□□□□ -0.4
SEC22CQ9BRL7 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SEC22CQ9BRL7 HSPA8P5-201ENST00000456928 2069 ntBASIC12.58□□□□□ -0.4
SEC22CQ9BRL7 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SEC22CQ9BRL7 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
SEC22CQ9BRL7 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
SEC22CQ9BRL7 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SEC22CQ9BRL7 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SEC22CQ9BRL7 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC12.58□□□□□ -0.4
SEC22CQ9BRL7 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SEC22CQ9BRL7 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SEC22CQ9BRL7 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SEC22CQ9BRL7 AL360270.3-201ENST00000609118 1348 ntBASIC12.58□□□□□ -0.4
SEC22CQ9BRL7 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SEC22CQ9BRL7 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SEC22CQ9BRL7 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SEC22CQ9BRL7 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SEC22CQ9BRL7 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SEC22CQ9BRL7 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SEC22CQ9BRL7 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SEC22CQ9BRL7 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SEC22CQ9BRL7 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SEC22CQ9BRL7 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SEC22CQ9BRL7 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC12.58□□□□□ -0.4
SEC22CQ9BRL7 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SEC22CQ9BRL7 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC12.57□□□□□ -0.4
SEC22CQ9BRL7 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
SEC22CQ9BRL7 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SEC22CQ9BRL7 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
SEC22CQ9BRL7 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC12.57□□□□□ -0.4
SEC22CQ9BRL7 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SEC22CQ9BRL7 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SEC22CQ9BRL7 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC12.57□□□□□ -0.4
SEC22CQ9BRL7 FAM214B-204ENST00000378566 2566 ntTSL 2 BASIC12.57□□□□□ -0.4
SEC22CQ9BRL7 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SEC22CQ9BRL7 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SEC22CQ9BRL7 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
SEC22CQ9BRL7 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC12.57□□□□□ -0.4
SEC22CQ9BRL7 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SEC22CQ9BRL7 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
SEC22CQ9BRL7 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SEC22CQ9BRL7 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SEC22CQ9BRL7 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
SEC22CQ9BRL7 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
SEC22CQ9BRL7 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SEC22CQ9BRL7 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
SEC22CQ9BRL7 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SEC22CQ9BRL7 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SEC22CQ9BRL7 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SEC22CQ9BRL7 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
SEC22CQ9BRL7 HLA-H-201ENST00000383620 1096 ntBASIC12.57□□□□□ -0.4
SEC22CQ9BRL7 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SEC22CQ9BRL7 COPS8-203ENST00000409334 794 ntTSL 5 BASIC12.57□□□□□ -0.4
SEC22CQ9BRL7 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC12.57□□□□□ -0.4
SEC22CQ9BRL7 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC12.57□□□□□ -0.4
SEC22CQ9BRL7 CRCP-205ENST00000431089 942 ntTSL 2 BASIC12.57□□□□□ -0.4
SEC22CQ9BRL7 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SEC22CQ9BRL7 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC12.57□□□□□ -0.4
SEC22CQ9BRL7 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SEC22CQ9BRL7 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC12.57□□□□□ -0.4
SEC22CQ9BRL7 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
SEC22CQ9BRL7 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC12.57□□□□□ -0.4
SEC22CQ9BRL7 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
SEC22CQ9BRL7 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC12.57□□□□□ -0.4
SEC22CQ9BRL7 STK3-218ENST00000617590 2485 ntTSL 5 BASIC12.57□□□□□ -0.4
SEC22CQ9BRL7 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SEC22CQ9BRL7 NCLP1-201ENST00000445357 1963 ntBASIC12.57□□□□□ -0.4
SEC22CQ9BRL7 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC12.57□□□□□ -0.4
SEC22CQ9BRL7 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms