Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
S1PR3Q99500 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
S1PR3Q99500 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
S1PR3Q99500 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
S1PR3Q99500 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC12.3□□□□□ -0.44
S1PR3Q99500 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
S1PR3Q99500 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
S1PR3Q99500 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
S1PR3Q99500 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC12.3□□□□□ -0.44
S1PR3Q99500 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
S1PR3Q99500 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
S1PR3Q99500 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
S1PR3Q99500 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
S1PR3Q99500 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
S1PR3Q99500 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
S1PR3Q99500 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
S1PR3Q99500 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
S1PR3Q99500 LSM5-207ENST00000410044 687 ntTSL 3 BASIC12.3□□□□□ -0.44
S1PR3Q99500 AL162726.2-201ENST00000438986 1017 ntBASIC12.3□□□□□ -0.44
S1PR3Q99500 GALT-202ENST00000450095 1280 ntTSL 2 BASIC12.3□□□□□ -0.44
S1PR3Q99500 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
S1PR3Q99500 TPT1P11-201ENST00000458482 498 ntBASIC12.3□□□□□ -0.44
S1PR3Q99500 GIMAP3P-201ENST00000495150 836 ntBASIC12.3□□□□□ -0.44
S1PR3Q99500 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
S1PR3Q99500 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
S1PR3Q99500 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
S1PR3Q99500 CTBP2P3-201ENST00000585629 1255 ntBASIC12.3□□□□□ -0.44
S1PR3Q99500 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
S1PR3Q99500 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC12.3□□□□□ -0.44
S1PR3Q99500 METTL26-214ENST00000614890 801 ntTSL 3 BASIC12.3□□□□□ -0.44
S1PR3Q99500 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
S1PR3Q99500 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
S1PR3Q99500 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
S1PR3Q99500 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
S1PR3Q99500 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
S1PR3Q99500 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
S1PR3Q99500 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC12.3□□□□□ -0.44
S1PR3Q99500 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
S1PR3Q99500 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.3□□□□□ -0.44
S1PR3Q99500 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
S1PR3Q99500 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.3□□□□□ -0.44
S1PR3Q99500 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
S1PR3Q99500 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
S1PR3Q99500 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
S1PR3Q99500 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
S1PR3Q99500 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
S1PR3Q99500 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
S1PR3Q99500 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
S1PR3Q99500 HNRNPA1P48-201ENST00000562726 1377 ntBASIC12.3□□□□□ -0.44
S1PR3Q99500 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
S1PR3Q99500 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
S1PR3Q99500 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
S1PR3Q99500 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
S1PR3Q99500 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
S1PR3Q99500 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC12.29□□□□□ -0.44
S1PR3Q99500 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC12.29□□□□□ -0.44
S1PR3Q99500 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
S1PR3Q99500 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
S1PR3Q99500 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
S1PR3Q99500 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
S1PR3Q99500 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
S1PR3Q99500 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC12.29□□□□□ -0.44
S1PR3Q99500 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
S1PR3Q99500 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
S1PR3Q99500 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
S1PR3Q99500 AGER-206ENST00000375070 1463 ntTSL 5 BASIC12.29□□□□□ -0.44
S1PR3Q99500 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC12.29□□□□□ -0.44
S1PR3Q99500 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
S1PR3Q99500 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
S1PR3Q99500 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
S1PR3Q99500 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
S1PR3Q99500 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
S1PR3Q99500 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
S1PR3Q99500 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
S1PR3Q99500 AC055811.4-201ENST00000624039 1754 ntBASIC12.29□□□□□ -0.44
S1PR3Q99500 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
S1PR3Q99500 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
S1PR3Q99500 RNU1-114P-201ENST00000365297 166 ntBASIC12.29□□□□□ -0.44
S1PR3Q99500 ACKR1-201ENST00000368121 1240 ntBASIC12.29□□□□□ -0.44
S1PR3Q99500 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
S1PR3Q99500 DGCR5-201ENST00000399539 862 ntBASIC12.29□□□□□ -0.44
S1PR3Q99500 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC12.29□□□□□ -0.44
S1PR3Q99500 KLF2P2-201ENST00000416807 1039 ntBASIC12.29□□□□□ -0.44
S1PR3Q99500 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.29□□□□□ -0.44
S1PR3Q99500 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC12.29□□□□□ -0.44
S1PR3Q99500 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC12.29□□□□□ -0.44
S1PR3Q99500 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC12.29□□□□□ -0.44
S1PR3Q99500 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC12.29□□□□□ -0.44
S1PR3Q99500 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
S1PR3Q99500 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC12.29□□□□□ -0.44
S1PR3Q99500 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
S1PR3Q99500 WASH4P-201ENST00000564273 1246 ntBASIC12.29□□□□□ -0.44
S1PR3Q99500 DUX4L47-201ENST00000566374 394 ntBASIC12.29□□□□□ -0.44
S1PR3Q99500 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC12.29□□□□□ -0.44
S1PR3Q99500 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC12.29□□□□□ -0.44
S1PR3Q99500 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
S1PR3Q99500 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
S1PR3Q99500 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
S1PR3Q99500 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
S1PR3Q99500 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms