Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDLIM5Q96HC4 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDLIM5Q96HC4 AC012617.1-204ENST00000586340 2305 ntBASIC14.44□□□□□ -0.1
PDLIM5Q96HC4 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PDLIM5Q96HC4 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.44□□□□□ -0.1
PDLIM5Q96HC4 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
PDLIM5Q96HC4 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDLIM5Q96HC4 KRT8P28-201ENST00000433288 1390 ntBASIC14.44□□□□□ -0.1
PDLIM5Q96HC4 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDLIM5Q96HC4 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PDLIM5Q96HC4 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.44□□□□□ -0.1
PDLIM5Q96HC4 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDLIM5Q96HC4 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PDLIM5Q96HC4 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.44□□□□□ -0.1
PDLIM5Q96HC4 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.44□□□□□ -0.1
PDLIM5Q96HC4 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDLIM5Q96HC4 AL359881.3-201ENST00000602640 1721 ntBASIC14.44□□□□□ -0.1
PDLIM5Q96HC4 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDLIM5Q96HC4 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDLIM5Q96HC4 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.43□□□□□ -0.1
PDLIM5Q96HC4 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
PDLIM5Q96HC4 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDLIM5Q96HC4 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
PDLIM5Q96HC4 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDLIM5Q96HC4 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC14.43□□□□□ -0.1
PDLIM5Q96HC4 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.43□□□□□ -0.1
PDLIM5Q96HC4 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
PDLIM5Q96HC4 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PDLIM5Q96HC4 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDLIM5Q96HC4 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC14.43□□□□□ -0.1
PDLIM5Q96HC4 AL137784.3-201ENST00000623858 2288 ntBASIC14.43□□□□□ -0.1
PDLIM5Q96HC4 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDLIM5Q96HC4 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDLIM5Q96HC4 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDLIM5Q96HC4 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDLIM5Q96HC4 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PDLIM5Q96HC4 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
PDLIM5Q96HC4 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.43□□□□□ -0.1
PDLIM5Q96HC4 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.43□□□□□ -0.1
PDLIM5Q96HC4 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.43□□□□□ -0.1
PDLIM5Q96HC4 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.43□□□□□ -0.1
PDLIM5Q96HC4 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.43□□□□□ -0.1
PDLIM5Q96HC4 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
PDLIM5Q96HC4 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PDLIM5Q96HC4 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14.43□□□□□ -0.1
PDLIM5Q96HC4 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.43□□□□□ -0.1
PDLIM5Q96HC4 AC027237.1-201ENST00000560942 655 ntBASIC14.43□□□□□ -0.1
PDLIM5Q96HC4 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC14.43□□□□□ -0.1
PDLIM5Q96HC4 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.43□□□□□ -0.1
PDLIM5Q96HC4 MIR4683-201ENST00000579659 81 ntBASIC14.43□□□□□ -0.1
PDLIM5Q96HC4 ZACNP1-201ENST00000612259 710 ntBASIC14.43□□□□□ -0.1
PDLIM5Q96HC4 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC14.43□□□□□ -0.1
PDLIM5Q96HC4 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDLIM5Q96HC4 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PDLIM5Q96HC4 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PDLIM5Q96HC4 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDLIM5Q96HC4 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
PDLIM5Q96HC4 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
PDLIM5Q96HC4 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
PDLIM5Q96HC4 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDLIM5Q96HC4 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDLIM5Q96HC4 OR2I1P-209ENST00000641730 5365 ntBASIC14.43□□□□□ -0.1
PDLIM5Q96HC4 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDLIM5Q96HC4 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDLIM5Q96HC4 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PDLIM5Q96HC4 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDLIM5Q96HC4 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PDLIM5Q96HC4 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDLIM5Q96HC4 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDLIM5Q96HC4 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDLIM5Q96HC4 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PDLIM5Q96HC4 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
PDLIM5Q96HC4 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.43□□□□□ -0.1
PDLIM5Q96HC4 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.43□□□□□ -0.1
PDLIM5Q96HC4 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC14.42□□□□□ -0.1
PDLIM5Q96HC4 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDLIM5Q96HC4 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDLIM5Q96HC4 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDLIM5Q96HC4 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDLIM5Q96HC4 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDLIM5Q96HC4 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.42□□□□□ -0.1
PDLIM5Q96HC4 LINC01230-201ENST00000625222 3017 ntBASIC14.42□□□□□ -0.1
PDLIM5Q96HC4 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PDLIM5Q96HC4 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.42□□□□□ -0.1
PDLIM5Q96HC4 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDLIM5Q96HC4 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDLIM5Q96HC4 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PDLIM5Q96HC4 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDLIM5Q96HC4 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PDLIM5Q96HC4 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
PDLIM5Q96HC4 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PDLIM5Q96HC4 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDLIM5Q96HC4 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDLIM5Q96HC4 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.42□□□□□ -0.1
PDLIM5Q96HC4 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
PDLIM5Q96HC4 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDLIM5Q96HC4 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.42□□□□□ -0.1
PDLIM5Q96HC4 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PDLIM5Q96HC4 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
PDLIM5Q96HC4 AC010141.1-201ENST00000411585 623 ntBASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms