Protein–RNA interactions for Protein: Q96DX7

TRIM44, Tripartite motif-containing protein 44, humanhuman

Predicted RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM44Q96DX7 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM44Q96DX7 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM44Q96DX7 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM44Q96DX7 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TRIM44Q96DX7 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TRIM44Q96DX7 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC16.8■□□□□ 0.28
TRIM44Q96DX7 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC16.8■□□□□ 0.28
TRIM44Q96DX7 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM44Q96DX7 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM44Q96DX7 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC16.8■□□□□ 0.28
TRIM44Q96DX7 ESPL1-205ENST00000552462 6447 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TRIM44Q96DX7 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TRIM44Q96DX7 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.8■□□□□ 0.28
TRIM44Q96DX7 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
TRIM44Q96DX7 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.8■□□□□ 0.28
TRIM44Q96DX7 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.8■□□□□ 0.28
TRIM44Q96DX7 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.8■□□□□ 0.28
TRIM44Q96DX7 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM44Q96DX7 IGHV3-65-201ENST00000523210 341 ntBASIC16.8■□□□□ 0.28
TRIM44Q96DX7 AP000867.3-201ENST00000524675 377 ntBASIC16.8■□□□□ 0.28
TRIM44Q96DX7 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TRIM44Q96DX7 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.8■□□□□ 0.28
TRIM44Q96DX7 SART3-203ENST00000546611 1184 ntBASIC16.8■□□□□ 0.28
TRIM44Q96DX7 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.8■□□□□ 0.28
TRIM44Q96DX7 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.8■□□□□ 0.28
TRIM44Q96DX7 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.8■□□□□ 0.28
TRIM44Q96DX7 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.8■□□□□ 0.28
TRIM44Q96DX7 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.8■□□□□ 0.28
TRIM44Q96DX7 AC006011.2-201ENST00000621313 1158 ntBASIC16.8■□□□□ 0.28
TRIM44Q96DX7 TBX3-201ENST00000257566 4208 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM44Q96DX7 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.8■□□□□ 0.28
TRIM44Q96DX7 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM44Q96DX7 HDLBP-214ENST00000427183 6238 ntTSL 2 BASIC16.8■□□□□ 0.28
TRIM44Q96DX7 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM44Q96DX7 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM44Q96DX7 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM44Q96DX7 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC16.8■□□□□ 0.28
TRIM44Q96DX7 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM44Q96DX7 AEBP1-201ENST00000223357 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM44Q96DX7 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM44Q96DX7 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM44Q96DX7 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.8■□□□□ 0.28
TRIM44Q96DX7 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
TRIM44Q96DX7 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.79■□□□□ 0.28
TRIM44Q96DX7 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC16.79■□□□□ 0.28
TRIM44Q96DX7 PCCB-210ENST00000471595 6090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM44Q96DX7 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM44Q96DX7 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM44Q96DX7 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC16.79■□□□□ 0.28
TRIM44Q96DX7 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC16.79■□□□□ 0.28
TRIM44Q96DX7 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM44Q96DX7 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM44Q96DX7 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM44Q96DX7 GSN-209ENST00000449733 2702 ntTSL 2 BASIC16.79■□□□□ 0.28
TRIM44Q96DX7 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM44Q96DX7 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM44Q96DX7 AC011498.7-201ENST00000624986 2027 ntBASIC16.79■□□□□ 0.28
TRIM44Q96DX7 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM44Q96DX7 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
TRIM44Q96DX7 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
TRIM44Q96DX7 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC16.79■□□□□ 0.28
TRIM44Q96DX7 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM44Q96DX7 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC16.79■□□□□ 0.28
TRIM44Q96DX7 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM44Q96DX7 AL157996.1-201ENST00000624684 2299 ntBASIC16.79■□□□□ 0.28
TRIM44Q96DX7 AC125807.2-201ENST00000513358 3514 ntBASIC16.79■□□□□ 0.28
TRIM44Q96DX7 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM44Q96DX7 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.79■□□□□ 0.28
TRIM44Q96DX7 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.79■□□□□ 0.28
TRIM44Q96DX7 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.79■□□□□ 0.28
TRIM44Q96DX7 AL139010.1-201ENST00000454878 894 ntBASIC16.79■□□□□ 0.28
TRIM44Q96DX7 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.79■□□□□ 0.28
TRIM44Q96DX7 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.79■□□□□ 0.28
TRIM44Q96DX7 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.79■□□□□ 0.28
TRIM44Q96DX7 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.79■□□□□ 0.28
TRIM44Q96DX7 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.79■□□□□ 0.28
TRIM44Q96DX7 AP006294.2-201ENST00000641667 209 ntBASIC16.79■□□□□ 0.28
TRIM44Q96DX7 AL645728.2-202ENST00000641679 227 ntBASIC16.79■□□□□ 0.28
TRIM44Q96DX7 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM44Q96DX7 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM44Q96DX7 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
TRIM44Q96DX7 TUBGCP2-210ENST00000543663 4302 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM44Q96DX7 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM44Q96DX7 FBN3-201ENST00000270509 9232 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM44Q96DX7 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM44Q96DX7 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM44Q96DX7 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM44Q96DX7 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
TRIM44Q96DX7 PCDHA6-201ENST00000378126 3267 ntBASIC16.79■□□□□ 0.28
TRIM44Q96DX7 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC16.79■□□□□ 0.28
TRIM44Q96DX7 PRR26-201ENST00000381489 7250 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM44Q96DX7 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM44Q96DX7 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC16.79■□□□□ 0.28
TRIM44Q96DX7 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC16.79■□□□□ 0.28
TRIM44Q96DX7 STK25-235ENST00000543554 2556 ntTSL 2 BASIC16.79■□□□□ 0.28
TRIM44Q96DX7 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM44Q96DX7 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
TRIM44Q96DX7 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM44Q96DX7 AC073508.3-201ENST00000619697 1419 ntBASIC16.79■□□□□ 0.28
TRIM44Q96DX7 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms