Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC13.76□□□□□ -0.21
HPS1Q92902 AF228730.6-201ENST00000641497 218 ntBASIC13.76□□□□□ -0.21
HPS1Q92902 AC084121.3-201ENST00000641716 218 ntBASIC13.76□□□□□ -0.21
HPS1Q92902 AC105233.6-201ENST00000642093 218 ntBASIC13.76□□□□□ -0.21
HPS1Q92902 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HPS1Q92902 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HPS1Q92902 TSN-212ENST00000536142 3328 ntTSL 2 BASIC13.76□□□□□ -0.21
HPS1Q92902 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HPS1Q92902 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HPS1Q92902 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HPS1Q92902 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.76□□□□□ -0.21
HPS1Q92902 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HPS1Q92902 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HPS1Q92902 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
HPS1Q92902 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
HPS1Q92902 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HPS1Q92902 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
HPS1Q92902 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
HPS1Q92902 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
HPS1Q92902 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HPS1Q92902 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HPS1Q92902 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HPS1Q92902 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HPS1Q92902 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HPS1Q92902 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HPS1Q92902 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC13.75□□□□□ -0.21
HPS1Q92902 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HPS1Q92902 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.75□□□□□ -0.21
HPS1Q92902 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
HPS1Q92902 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HPS1Q92902 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC13.75□□□□□ -0.21
HPS1Q92902 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
HPS1Q92902 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.75□□□□□ -0.21
HPS1Q92902 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
HPS1Q92902 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC13.75□□□□□ -0.21
HPS1Q92902 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC13.75□□□□□ -0.21
HPS1Q92902 AC063926.2-201ENST00000623766 1308 ntBASIC13.75□□□□□ -0.21
HPS1Q92902 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
HPS1Q92902 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
HPS1Q92902 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HPS1Q92902 AC113367.3-201ENST00000508316 1912 ntBASIC13.75□□□□□ -0.21
HPS1Q92902 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
HPS1Q92902 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HPS1Q92902 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HPS1Q92902 CCDC152-202ENST00000388827 1237 ntTSL 2 BASIC13.75□□□□□ -0.21
HPS1Q92902 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HPS1Q92902 METTL26-204ENST00000397665 558 ntTSL 2 BASIC13.75□□□□□ -0.21
HPS1Q92902 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
HPS1Q92902 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC13.75□□□□□ -0.21
HPS1Q92902 AC007919.2-201ENST00000444110 511 ntBASIC13.75□□□□□ -0.21
HPS1Q92902 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HPS1Q92902 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HPS1Q92902 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.75□□□□□ -0.21
HPS1Q92902 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC13.75□□□□□ -0.21
HPS1Q92902 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC13.75□□□□□ -0.21
HPS1Q92902 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.75□□□□□ -0.21
HPS1Q92902 AL079304.1-201ENST00000554595 828 ntTSL 2 BASIC13.75□□□□□ -0.21
HPS1Q92902 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.75□□□□□ -0.21
HPS1Q92902 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
HPS1Q92902 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.75□□□□□ -0.21
HPS1Q92902 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HPS1Q92902 AL358472.5-202ENST00000641448 1267 ntBASIC13.75□□□□□ -0.21
HPS1Q92902 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HPS1Q92902 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
HPS1Q92902 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.75□□□□□ -0.21
HPS1Q92902 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
HPS1Q92902 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HPS1Q92902 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
HPS1Q92902 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
HPS1Q92902 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
HPS1Q92902 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
HPS1Q92902 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.75□□□□□ -0.21
HPS1Q92902 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HPS1Q92902 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.75□□□□□ -0.21
HPS1Q92902 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC13.75□□□□□ -0.21
HPS1Q92902 AP3S2-216ENST00000617003 1561 ntBASIC13.75□□□□□ -0.21
HPS1Q92902 AP001267.2-201ENST00000532619 2086 ntBASIC13.75□□□□□ -0.21
HPS1Q92902 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HPS1Q92902 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HPS1Q92902 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC13.74□□□□□ -0.21
HPS1Q92902 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.74□□□□□ -0.21
HPS1Q92902 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
HPS1Q92902 BEND3P3-201ENST00000611030 2440 ntBASIC13.74□□□□□ -0.21
HPS1Q92902 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
HPS1Q92902 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.74□□□□□ -0.21
HPS1Q92902 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HPS1Q92902 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
HPS1Q92902 MTHFR-210ENST00000641407 2387 ntBASIC13.74□□□□□ -0.21
HPS1Q92902 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
HPS1Q92902 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HPS1Q92902 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HPS1Q92902 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.74□□□□□ -0.21
HPS1Q92902 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC13.74□□□□□ -0.21
HPS1Q92902 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HPS1Q92902 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HPS1Q92902 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HPS1Q92902 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HPS1Q92902 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HPS1Q92902 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC13.74□□□□□ -0.21
HPS1Q92902 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms