Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CKAP2Q8WWK9 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
CKAP2Q8WWK9 TUBB3P1-201ENST00000405796 1332 ntBASIC14.75□□□□□ -0.05
CKAP2Q8WWK9 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CKAP2Q8WWK9 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CKAP2Q8WWK9 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CKAP2Q8WWK9 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CKAP2Q8WWK9 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CKAP2Q8WWK9 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CKAP2Q8WWK9 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
CKAP2Q8WWK9 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.75□□□□□ -0.05
CKAP2Q8WWK9 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.75□□□□□ -0.05
CKAP2Q8WWK9 AL353779.1-201ENST00000434793 351 ntBASIC14.75□□□□□ -0.05
CKAP2Q8WWK9 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.75□□□□□ -0.05
CKAP2Q8WWK9 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CKAP2Q8WWK9 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
CKAP2Q8WWK9 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.75□□□□□ -0.05
CKAP2Q8WWK9 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CKAP2Q8WWK9 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CKAP2Q8WWK9 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CKAP2Q8WWK9 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CKAP2Q8WWK9 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CKAP2Q8WWK9 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CKAP2Q8WWK9 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CKAP2Q8WWK9 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
CKAP2Q8WWK9 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CKAP2Q8WWK9 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CKAP2Q8WWK9 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC14.75□□□□□ -0.05
CKAP2Q8WWK9 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC14.75□□□□□ -0.05
CKAP2Q8WWK9 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CKAP2Q8WWK9 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CKAP2Q8WWK9 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CKAP2Q8WWK9 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CKAP2Q8WWK9 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CKAP2Q8WWK9 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CKAP2Q8WWK9 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CKAP2Q8WWK9 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CKAP2Q8WWK9 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CKAP2Q8WWK9 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.75□□□□□ -0.05
CKAP2Q8WWK9 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CKAP2Q8WWK9 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC14.75□□□□□ -0.05
CKAP2Q8WWK9 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CKAP2Q8WWK9 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC14.74□□□□□ -0.05
CKAP2Q8WWK9 AL136172.1-201ENST00000598590 1394 ntBASIC14.74□□□□□ -0.05
CKAP2Q8WWK9 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.74□□□□□ -0.05
CKAP2Q8WWK9 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC14.74□□□□□ -0.05
CKAP2Q8WWK9 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CKAP2Q8WWK9 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC14.74□□□□□ -0.05
CKAP2Q8WWK9 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CKAP2Q8WWK9 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC14.74□□□□□ -0.05
CKAP2Q8WWK9 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CKAP2Q8WWK9 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CKAP2Q8WWK9 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CKAP2Q8WWK9 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CKAP2Q8WWK9 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CKAP2Q8WWK9 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CKAP2Q8WWK9 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CKAP2Q8WWK9 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
CKAP2Q8WWK9 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CKAP2Q8WWK9 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
CKAP2Q8WWK9 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CKAP2Q8WWK9 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CKAP2Q8WWK9 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CKAP2Q8WWK9 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CKAP2Q8WWK9 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.74□□□□□ -0.05
CKAP2Q8WWK9 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CKAP2Q8WWK9 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.74□□□□□ -0.05
CKAP2Q8WWK9 AC005237.2-201ENST00000434368 219 ntBASIC14.74□□□□□ -0.05
CKAP2Q8WWK9 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.74□□□□□ -0.05
CKAP2Q8WWK9 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CKAP2Q8WWK9 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.74□□□□□ -0.05
CKAP2Q8WWK9 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
CKAP2Q8WWK9 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CKAP2Q8WWK9 AC023511.2-201ENST00000618803 211 ntBASIC14.74□□□□□ -0.05
CKAP2Q8WWK9 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CKAP2Q8WWK9 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC14.74□□□□□ -0.05
CKAP2Q8WWK9 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CKAP2Q8WWK9 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CKAP2Q8WWK9 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.74□□□□□ -0.05
CKAP2Q8WWK9 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.74□□□□□ -0.05
CKAP2Q8WWK9 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CKAP2Q8WWK9 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC14.74□□□□□ -0.05
CKAP2Q8WWK9 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CKAP2Q8WWK9 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CKAP2Q8WWK9 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC14.74□□□□□ -0.05
CKAP2Q8WWK9 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CKAP2Q8WWK9 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC14.74□□□□□ -0.05
CKAP2Q8WWK9 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.74□□□□□ -0.05
CKAP2Q8WWK9 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CKAP2Q8WWK9 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CKAP2Q8WWK9 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC14.74□□□□□ -0.05
CKAP2Q8WWK9 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CKAP2Q8WWK9 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CKAP2Q8WWK9 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CKAP2Q8WWK9 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.74□□□□□ -0.05
CKAP2Q8WWK9 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CKAP2Q8WWK9 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CKAP2Q8WWK9 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CKAP2Q8WWK9 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC14.74□□□□□ -0.05
CKAP2Q8WWK9 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms