Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 PRSS30P-206ENST00000641773 873 ntBASIC13.39□□□□□ -0.27
BBS1Q8NFJ9 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
BBS1Q8NFJ9 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
BBS1Q8NFJ9 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
BBS1Q8NFJ9 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.39□□□□□ -0.27
BBS1Q8NFJ9 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
BBS1Q8NFJ9 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
BBS1Q8NFJ9 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
BBS1Q8NFJ9 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
BBS1Q8NFJ9 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
BBS1Q8NFJ9 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
BBS1Q8NFJ9 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
BBS1Q8NFJ9 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
BBS1Q8NFJ9 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.39□□□□□ -0.27
BBS1Q8NFJ9 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
BBS1Q8NFJ9 AC011498.7-201ENST00000624986 2027 ntBASIC13.39□□□□□ -0.27
BBS1Q8NFJ9 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
BBS1Q8NFJ9 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.39□□□□□ -0.27
BBS1Q8NFJ9 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC13.38□□□□□ -0.27
BBS1Q8NFJ9 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
BBS1Q8NFJ9 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.38□□□□□ -0.27
BBS1Q8NFJ9 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
BBS1Q8NFJ9 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
BBS1Q8NFJ9 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.38□□□□□ -0.27
BBS1Q8NFJ9 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
BBS1Q8NFJ9 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
BBS1Q8NFJ9 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
BBS1Q8NFJ9 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
BBS1Q8NFJ9 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
BBS1Q8NFJ9 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
BBS1Q8NFJ9 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
BBS1Q8NFJ9 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
BBS1Q8NFJ9 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
BBS1Q8NFJ9 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
BBS1Q8NFJ9 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
BBS1Q8NFJ9 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.38□□□□□ -0.27
BBS1Q8NFJ9 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
BBS1Q8NFJ9 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
BBS1Q8NFJ9 RNU1-114P-201ENST00000365297 166 ntBASIC13.38□□□□□ -0.27
BBS1Q8NFJ9 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
BBS1Q8NFJ9 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.38□□□□□ -0.27
BBS1Q8NFJ9 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.38□□□□□ -0.27
BBS1Q8NFJ9 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.38□□□□□ -0.27
BBS1Q8NFJ9 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
BBS1Q8NFJ9 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.38□□□□□ -0.27
BBS1Q8NFJ9 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC13.38□□□□□ -0.27
BBS1Q8NFJ9 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.38□□□□□ -0.27
BBS1Q8NFJ9 RPL28-205ENST00000558131 444 ntTSL 5 BASIC13.38□□□□□ -0.27
BBS1Q8NFJ9 RARRES2P5-201ENST00000564013 466 ntBASIC13.38□□□□□ -0.27
BBS1Q8NFJ9 AC104794.3-201ENST00000566840 1248 ntBASIC13.38□□□□□ -0.27
BBS1Q8NFJ9 LSM12-202ENST00000585388 942 ntTSL 3 BASIC13.38□□□□□ -0.27
BBS1Q8NFJ9 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC13.38□□□□□ -0.27
BBS1Q8NFJ9 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.38□□□□□ -0.27
BBS1Q8NFJ9 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
BBS1Q8NFJ9 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.38□□□□□ -0.27
BBS1Q8NFJ9 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
BBS1Q8NFJ9 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
BBS1Q8NFJ9 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
BBS1Q8NFJ9 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
BBS1Q8NFJ9 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
BBS1Q8NFJ9 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
BBS1Q8NFJ9 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
BBS1Q8NFJ9 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
BBS1Q8NFJ9 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
BBS1Q8NFJ9 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
BBS1Q8NFJ9 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
BBS1Q8NFJ9 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.38□□□□□ -0.27
BBS1Q8NFJ9 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BBS1Q8NFJ9 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
BBS1Q8NFJ9 SALL4P5-201ENST00000419001 1760 ntBASIC13.37□□□□□ -0.27
BBS1Q8NFJ9 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.37□□□□□ -0.27
BBS1Q8NFJ9 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BBS1Q8NFJ9 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
BBS1Q8NFJ9 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
BBS1Q8NFJ9 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
BBS1Q8NFJ9 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
BBS1Q8NFJ9 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BBS1Q8NFJ9 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.37□□□□□ -0.27
BBS1Q8NFJ9 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
BBS1Q8NFJ9 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BBS1Q8NFJ9 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BBS1Q8NFJ9 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
BBS1Q8NFJ9 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
BBS1Q8NFJ9 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
BBS1Q8NFJ9 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
BBS1Q8NFJ9 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
BBS1Q8NFJ9 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
BBS1Q8NFJ9 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
BBS1Q8NFJ9 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
BBS1Q8NFJ9 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
BBS1Q8NFJ9 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.37□□□□□ -0.27
BBS1Q8NFJ9 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
BBS1Q8NFJ9 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BBS1Q8NFJ9 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
BBS1Q8NFJ9 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
BBS1Q8NFJ9 FAM86GP-201ENST00000448322 971 ntBASIC13.37□□□□□ -0.27
BBS1Q8NFJ9 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.37□□□□□ -0.27
BBS1Q8NFJ9 RN7SL399P-201ENST00000471648 279 ntBASIC13.37□□□□□ -0.27
BBS1Q8NFJ9 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
BBS1Q8NFJ9 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms