Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
SCUBE3Q8IX30 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SCUBE3Q8IX30 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.61■□□□□ 0.09
SCUBE3Q8IX30 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
SCUBE3Q8IX30 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.61■□□□□ 0.09
SCUBE3Q8IX30 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SCUBE3Q8IX30 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SCUBE3Q8IX30 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.61■□□□□ 0.09
SCUBE3Q8IX30 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
SCUBE3Q8IX30 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
SCUBE3Q8IX30 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SCUBE3Q8IX30 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SCUBE3Q8IX30 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SCUBE3Q8IX30 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
SCUBE3Q8IX30 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SCUBE3Q8IX30 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
SCUBE3Q8IX30 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
SCUBE3Q8IX30 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.61■□□□□ 0.09
SCUBE3Q8IX30 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.61■□□□□ 0.09
SCUBE3Q8IX30 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
SCUBE3Q8IX30 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC15.61■□□□□ 0.09
SCUBE3Q8IX30 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC15.61■□□□□ 0.09
SCUBE3Q8IX30 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SCUBE3Q8IX30 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC15.61■□□□□ 0.09
SCUBE3Q8IX30 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
SCUBE3Q8IX30 DUX4L45-201ENST00000566406 1057 ntBASIC15.61■□□□□ 0.09
SCUBE3Q8IX30 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
SCUBE3Q8IX30 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.61■□□□□ 0.09
SCUBE3Q8IX30 MIR4538-201ENST00000581377 78 ntBASIC15.61■□□□□ 0.09
SCUBE3Q8IX30 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
SCUBE3Q8IX30 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SCUBE3Q8IX30 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
SCUBE3Q8IX30 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SCUBE3Q8IX30 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.61■□□□□ 0.09
SCUBE3Q8IX30 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
SCUBE3Q8IX30 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SCUBE3Q8IX30 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SCUBE3Q8IX30 RAB5A-203ENST00000422242 1443 ntTSL 2 BASIC15.6■□□□□ 0.09
SCUBE3Q8IX30 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SCUBE3Q8IX30 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.6■□□□□ 0.09
SCUBE3Q8IX30 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.6■□□□□ 0.09
SCUBE3Q8IX30 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SCUBE3Q8IX30 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
SCUBE3Q8IX30 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
SCUBE3Q8IX30 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
SCUBE3Q8IX30 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SCUBE3Q8IX30 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
SCUBE3Q8IX30 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.6■□□□□ 0.09
SCUBE3Q8IX30 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.6■□□□□ 0.09
SCUBE3Q8IX30 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SCUBE3Q8IX30 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SCUBE3Q8IX30 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SCUBE3Q8IX30 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SCUBE3Q8IX30 AL136309.1-201ENST00000403917 691 ntBASIC15.6■□□□□ 0.09
SCUBE3Q8IX30 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SCUBE3Q8IX30 FAM21FP-201ENST00000426241 1131 ntBASIC15.6■□□□□ 0.09
SCUBE3Q8IX30 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SCUBE3Q8IX30 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SCUBE3Q8IX30 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
SCUBE3Q8IX30 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC15.6■□□□□ 0.09
SCUBE3Q8IX30 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC15.6■□□□□ 0.09
SCUBE3Q8IX30 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15.6■□□□□ 0.09
SCUBE3Q8IX30 AC005912.2-201ENST00000619492 2400 ntBASIC15.6■□□□□ 0.09
SCUBE3Q8IX30 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.6■□□□□ 0.09
SCUBE3Q8IX30 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.6■□□□□ 0.09
SCUBE3Q8IX30 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SCUBE3Q8IX30 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SCUBE3Q8IX30 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SCUBE3Q8IX30 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC15.6■□□□□ 0.09
SCUBE3Q8IX30 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SCUBE3Q8IX30 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC15.6■□□□□ 0.09
SCUBE3Q8IX30 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.6■□□□□ 0.09
SCUBE3Q8IX30 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SCUBE3Q8IX30 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
SCUBE3Q8IX30 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
SCUBE3Q8IX30 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.6■□□□□ 0.09
SCUBE3Q8IX30 AL023775.1-201ENST00000454907 1746 ntBASIC15.6■□□□□ 0.09
SCUBE3Q8IX30 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SCUBE3Q8IX30 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SCUBE3Q8IX30 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SCUBE3Q8IX30 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
SCUBE3Q8IX30 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
SCUBE3Q8IX30 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SCUBE3Q8IX30 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SCUBE3Q8IX30 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SCUBE3Q8IX30 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
SCUBE3Q8IX30 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SCUBE3Q8IX30 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.59■□□□□ 0.09
SCUBE3Q8IX30 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
SCUBE3Q8IX30 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.59■□□□□ 0.09
SCUBE3Q8IX30 RPL23A-204ENST00000422514 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SCUBE3Q8IX30 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
SCUBE3Q8IX30 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
SCUBE3Q8IX30 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SCUBE3Q8IX30 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SCUBE3Q8IX30 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
SCUBE3Q8IX30 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SCUBE3Q8IX30 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SCUBE3Q8IX30 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.59■□□□□ 0.09
SCUBE3Q8IX30 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms