Protein–RNA interactions for Protein: Q7L7L0

HIST3H2A, Histone H2A type 3, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2AQ7L7L0 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST3H2AQ7L7L0 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.61□□□□□ -0.23
HIST3H2AQ7L7L0 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.61□□□□□ -0.23
HIST3H2AQ7L7L0 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.61□□□□□ -0.23
HIST3H2AQ7L7L0 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC13.61□□□□□ -0.23
HIST3H2AQ7L7L0 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
HIST3H2AQ7L7L0 AP005019.2-201ENST00000615104 511 ntBASIC13.61□□□□□ -0.23
HIST3H2AQ7L7L0 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.61□□□□□ -0.23
HIST3H2AQ7L7L0 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST3H2AQ7L7L0 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST3H2AQ7L7L0 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.61□□□□□ -0.23
HIST3H2AQ7L7L0 AC079781.5-202ENST00000641784 3743 ntBASIC13.61□□□□□ -0.23
HIST3H2AQ7L7L0 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST3H2AQ7L7L0 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.61□□□□□ -0.23
HIST3H2AQ7L7L0 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HIST3H2AQ7L7L0 AC023090.2-201ENST00000625182 2110 ntBASIC13.61□□□□□ -0.23
HIST3H2AQ7L7L0 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
HIST3H2AQ7L7L0 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.61□□□□□ -0.23
HIST3H2AQ7L7L0 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HIST3H2AQ7L7L0 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
HIST3H2AQ7L7L0 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HIST3H2AQ7L7L0 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST3H2AQ7L7L0 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
HIST3H2AQ7L7L0 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HIST3H2AQ7L7L0 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST3H2AQ7L7L0 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST3H2AQ7L7L0 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST3H2AQ7L7L0 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
HIST3H2AQ7L7L0 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST3H2AQ7L7L0 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST3H2AQ7L7L0 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HIST3H2AQ7L7L0 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST3H2AQ7L7L0 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST3H2AQ7L7L0 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST3H2AQ7L7L0 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HIST3H2AQ7L7L0 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST3H2AQ7L7L0 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST3H2AQ7L7L0 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.6□□□□□ -0.23
HIST3H2AQ7L7L0 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
HIST3H2AQ7L7L0 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST3H2AQ7L7L0 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.6□□□□□ -0.23
HIST3H2AQ7L7L0 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HIST3H2AQ7L7L0 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
HIST3H2AQ7L7L0 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST3H2AQ7L7L0 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST3H2AQ7L7L0 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
HIST3H2AQ7L7L0 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
HIST3H2AQ7L7L0 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.6□□□□□ -0.23
HIST3H2AQ7L7L0 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST3H2AQ7L7L0 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
HIST3H2AQ7L7L0 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST3H2AQ7L7L0 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.6□□□□□ -0.23
HIST3H2AQ7L7L0 KLF2P2-201ENST00000416807 1039 ntBASIC13.6□□□□□ -0.23
HIST3H2AQ7L7L0 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.6□□□□□ -0.23
HIST3H2AQ7L7L0 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HIST3H2AQ7L7L0 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.6□□□□□ -0.23
HIST3H2AQ7L7L0 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.6□□□□□ -0.23
HIST3H2AQ7L7L0 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
HIST3H2AQ7L7L0 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HIST3H2AQ7L7L0 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HIST3H2AQ7L7L0 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.6□□□□□ -0.23
HIST3H2AQ7L7L0 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC13.6□□□□□ -0.23
HIST3H2AQ7L7L0 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HIST3H2AQ7L7L0 AC124283.3-201ENST00000570869 594 ntBASIC13.6□□□□□ -0.23
HIST3H2AQ7L7L0 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC13.6□□□□□ -0.23
HIST3H2AQ7L7L0 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST3H2AQ7L7L0 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.6□□□□□ -0.23
HIST3H2AQ7L7L0 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.6□□□□□ -0.23
HIST3H2AQ7L7L0 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.6□□□□□ -0.23
HIST3H2AQ7L7L0 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.6□□□□□ -0.23
HIST3H2AQ7L7L0 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST3H2AQ7L7L0 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST3H2AQ7L7L0 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.6□□□□□ -0.23
HIST3H2AQ7L7L0 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HIST3H2AQ7L7L0 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST3H2AQ7L7L0 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.6□□□□□ -0.23
HIST3H2AQ7L7L0 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.6□□□□□ -0.23
HIST3H2AQ7L7L0 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST3H2AQ7L7L0 AC055811.4-201ENST00000624039 1754 ntBASIC13.6□□□□□ -0.23
HIST3H2AQ7L7L0 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST3H2AQ7L7L0 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST3H2AQ7L7L0 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
HIST3H2AQ7L7L0 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.6□□□□□ -0.23
HIST3H2AQ7L7L0 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST3H2AQ7L7L0 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
HIST3H2AQ7L7L0 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST3H2AQ7L7L0 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST3H2AQ7L7L0 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST3H2AQ7L7L0 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HIST3H2AQ7L7L0 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST3H2AQ7L7L0 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
HIST3H2AQ7L7L0 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.59□□□□□ -0.23
HIST3H2AQ7L7L0 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST3H2AQ7L7L0 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.59□□□□□ -0.23
HIST3H2AQ7L7L0 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.59□□□□□ -0.23
HIST3H2AQ7L7L0 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.59□□□□□ -0.23
HIST3H2AQ7L7L0 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST3H2AQ7L7L0 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
HIST3H2AQ7L7L0 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
HIST3H2AQ7L7L0 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms