Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
MRPL54Q6P161 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC11.24□□□□□ -0.61
MRPL54Q6P161 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
MRPL54Q6P161 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
MRPL54Q6P161 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
MRPL54Q6P161 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
MRPL54Q6P161 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
MRPL54Q6P161 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
MRPL54Q6P161 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
MRPL54Q6P161 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
MRPL54Q6P161 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
MRPL54Q6P161 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
MRPL54Q6P161 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC11.24□□□□□ -0.61
MRPL54Q6P161 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
MRPL54Q6P161 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
MRPL54Q6P161 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
MRPL54Q6P161 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC11.24□□□□□ -0.61
MRPL54Q6P161 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC11.24□□□□□ -0.61
MRPL54Q6P161 PFN2-205ENST00000461868 613 ntTSL 2 BASIC11.24□□□□□ -0.61
MRPL54Q6P161 FXR1-221ENST00000491674 365 ntTSL 2 BASIC11.24□□□□□ -0.61
MRPL54Q6P161 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
MRPL54Q6P161 MAL2-202ENST00000531508 892 ntTSL 3 BASIC11.24□□□□□ -0.61
MRPL54Q6P161 PPOX-219ENST00000544598 813 ntTSL 2 BASIC11.24□□□□□ -0.61
MRPL54Q6P161 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC11.24□□□□□ -0.61
MRPL54Q6P161 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC11.24□□□□□ -0.61
MRPL54Q6P161 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC11.24□□□□□ -0.61
MRPL54Q6P161 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC11.24□□□□□ -0.61
MRPL54Q6P161 AC026979.3-201ENST00000607315 403 ntBASIC11.24□□□□□ -0.61
MRPL54Q6P161 AL161645.1-201ENST00000622716 1255 ntBASIC11.24□□□□□ -0.61
MRPL54Q6P161 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
MRPL54Q6P161 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
MRPL54Q6P161 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
MRPL54Q6P161 AC090114.2-201ENST00000608477 7054 ntBASIC11.24□□□□□ -0.61
MRPL54Q6P161 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
MRPL54Q6P161 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC11.24□□□□□ -0.61
MRPL54Q6P161 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
MRPL54Q6P161 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
MRPL54Q6P161 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
MRPL54Q6P161 AC072061.1-201ENST00000569710 2234 ntBASIC11.24□□□□□ -0.61
MRPL54Q6P161 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
MRPL54Q6P161 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
MRPL54Q6P161 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
MRPL54Q6P161 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
MRPL54Q6P161 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC11.24□□□□□ -0.61
MRPL54Q6P161 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC11.24□□□□□ -0.61
MRPL54Q6P161 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
MRPL54Q6P161 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
MRPL54Q6P161 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
MRPL54Q6P161 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
MRPL54Q6P161 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
MRPL54Q6P161 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC11.23□□□□□ -0.61
MRPL54Q6P161 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
MRPL54Q6P161 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
MRPL54Q6P161 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC11.23□□□□□ -0.61
MRPL54Q6P161 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
MRPL54Q6P161 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
MRPL54Q6P161 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC11.23□□□□□ -0.61
MRPL54Q6P161 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC11.23□□□□□ -0.61
MRPL54Q6P161 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
MRPL54Q6P161 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
MRPL54Q6P161 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC11.23□□□□□ -0.61
MRPL54Q6P161 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC11.23□□□□□ -0.61
MRPL54Q6P161 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
MRPL54Q6P161 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC11.23□□□□□ -0.61
MRPL54Q6P161 PES1-204ENST00000402284 2144 ntTSL 5 BASIC11.23□□□□□ -0.61
MRPL54Q6P161 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
MRPL54Q6P161 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
MRPL54Q6P161 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
MRPL54Q6P161 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
MRPL54Q6P161 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
MRPL54Q6P161 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
MRPL54Q6P161 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
MRPL54Q6P161 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
MRPL54Q6P161 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC11.23□□□□□ -0.61
MRPL54Q6P161 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC11.23□□□□□ -0.61
MRPL54Q6P161 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
MRPL54Q6P161 AGAP10P-201ENST00000454844 2418 ntBASIC11.23□□□□□ -0.61
MRPL54Q6P161 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC11.23□□□□□ -0.61
MRPL54Q6P161 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
MRPL54Q6P161 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
MRPL54Q6P161 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC11.23□□□□□ -0.61
MRPL54Q6P161 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
MRPL54Q6P161 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC11.23□□□□□ -0.61
MRPL54Q6P161 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC11.23□□□□□ -0.61
MRPL54Q6P161 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC11.23□□□□□ -0.61
MRPL54Q6P161 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC11.23□□□□□ -0.61
MRPL54Q6P161 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC11.23□□□□□ -0.61
MRPL54Q6P161 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC11.23□□□□□ -0.61
MRPL54Q6P161 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC11.23□□□□□ -0.61
MRPL54Q6P161 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
MRPL54Q6P161 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC11.23□□□□□ -0.61
MRPL54Q6P161 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
MRPL54Q6P161 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
MRPL54Q6P161 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
MRPL54Q6P161 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
MRPL54Q6P161 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC11.23□□□□□ -0.61
MRPL54Q6P161 AC010336.1-201ENST00000539278 4739 ntBASIC11.23□□□□□ -0.61
MRPL54Q6P161 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
MRPL54Q6P161 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
MRPL54Q6P161 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 262.7 ms