Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC16.69■□□□□ 0.26
CCNA1P78396 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCNA1P78396 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCNA1P78396 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCNA1P78396 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCNA1P78396 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC16.69■□□□□ 0.26
CCNA1P78396 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCNA1P78396 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCNA1P78396 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.69■□□□□ 0.26
CCNA1P78396 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCNA1P78396 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC16.69■□□□□ 0.26
CCNA1P78396 ORAOV1P1-201ENST00000503108 395 ntBASIC16.69■□□□□ 0.26
CCNA1P78396 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCNA1P78396 POLD4-208ENST00000532830 904 ntTSL 3 BASIC16.69■□□□□ 0.26
CCNA1P78396 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC16.69■□□□□ 0.26
CCNA1P78396 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC16.69■□□□□ 0.26
CCNA1P78396 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CCNA1P78396 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCNA1P78396 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC16.69■□□□□ 0.26
CCNA1P78396 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC16.69■□□□□ 0.26
CCNA1P78396 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC16.69■□□□□ 0.26
CCNA1P78396 AP001184.1-201ENST00000637936 376 ntBASIC16.69■□□□□ 0.26
CCNA1P78396 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CCNA1P78396 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCNA1P78396 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCNA1P78396 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.69■□□□□ 0.26
CCNA1P78396 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCNA1P78396 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCNA1P78396 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCNA1P78396 AC139712.1-201ENST00000378256 1875 ntBASIC16.69■□□□□ 0.26
CCNA1P78396 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.69■□□□□ 0.26
CCNA1P78396 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCNA1P78396 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCNA1P78396 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.69■□□□□ 0.26
CCNA1P78396 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCNA1P78396 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCNA1P78396 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC16.69■□□□□ 0.26
CCNA1P78396 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCNA1P78396 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCNA1P78396 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC16.68■□□□□ 0.26
CCNA1P78396 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.68■□□□□ 0.26
CCNA1P78396 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
CCNA1P78396 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CCNA1P78396 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCNA1P78396 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.68■□□□□ 0.26
CCNA1P78396 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCNA1P78396 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC16.68■□□□□ 0.26
CCNA1P78396 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCNA1P78396 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCNA1P78396 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCNA1P78396 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCNA1P78396 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCNA1P78396 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCNA1P78396 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCNA1P78396 AC012362.1-201ENST00000434906 739 ntBASIC16.68■□□□□ 0.26
CCNA1P78396 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC16.68■□□□□ 0.26
CCNA1P78396 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CCNA1P78396 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CCNA1P78396 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCNA1P78396 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCNA1P78396 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC16.68■□□□□ 0.26
CCNA1P78396 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC16.68■□□□□ 0.26
CCNA1P78396 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CCNA1P78396 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCNA1P78396 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
CCNA1P78396 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCNA1P78396 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CCNA1P78396 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCNA1P78396 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CCNA1P78396 AC136621.1-201ENST00000624017 2304 ntBASIC16.68■□□□□ 0.26
CCNA1P78396 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCNA1P78396 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CCNA1P78396 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCNA1P78396 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCNA1P78396 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCNA1P78396 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCNA1P78396 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CCNA1P78396 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCNA1P78396 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCNA1P78396 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.67■□□□□ 0.26
CCNA1P78396 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.67■□□□□ 0.26
CCNA1P78396 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCNA1P78396 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.67■□□□□ 0.26
CCNA1P78396 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCNA1P78396 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCNA1P78396 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCNA1P78396 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC16.67■□□□□ 0.26
CCNA1P78396 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCNA1P78396 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCNA1P78396 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC16.67■□□□□ 0.26
CCNA1P78396 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCNA1P78396 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
CCNA1P78396 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCNA1P78396 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.67■□□□□ 0.26
CCNA1P78396 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCNA1P78396 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCNA1P78396 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC16.67■□□□□ 0.26
CCNA1P78396 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC16.67■□□□□ 0.26
CCNA1P78396 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC16.67■□□□□ 0.26
CCNA1P78396 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms