Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN6P56747 CYP4F23P-201ENST00000593402 1579 ntBASIC14.2□□□□□ -0.14
CLDN6P56747 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CLDN6P56747 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN6P56747 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN6P56747 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN6P56747 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN6P56747 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.2□□□□□ -0.14
CLDN6P56747 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.2□□□□□ -0.14
CLDN6P56747 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN6P56747 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN6P56747 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.2□□□□□ -0.14
CLDN6P56747 AC007326.2-201ENST00000624224 7579 ntBASIC14.2□□□□□ -0.14
CLDN6P56747 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLDN6P56747 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN6P56747 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.19□□□□□ -0.14
CLDN6P56747 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN6P56747 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN6P56747 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CLDN6P56747 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CLDN6P56747 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CLDN6P56747 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN6P56747 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
CLDN6P56747 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN6P56747 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN6P56747 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.19□□□□□ -0.14
CLDN6P56747 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
CLDN6P56747 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CLDN6P56747 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN6P56747 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.19□□□□□ -0.14
CLDN6P56747 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN6P56747 SOD2-202ENST00000367054 815 ntTSL 2 BASIC14.19□□□□□ -0.14
CLDN6P56747 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN6P56747 Z69890.1-201ENST00000382990 339 ntBASIC14.19□□□□□ -0.14
CLDN6P56747 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC14.19□□□□□ -0.14
CLDN6P56747 RPL7P35-201ENST00000446943 740 ntBASIC14.19□□□□□ -0.14
CLDN6P56747 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC14.19□□□□□ -0.14
CLDN6P56747 AC006122.1-201ENST00000493323 440 ntBASIC14.19□□□□□ -0.14
CLDN6P56747 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC14.19□□□□□ -0.14
CLDN6P56747 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CLDN6P56747 AC009884.2-201ENST00000603110 324 ntBASIC14.19□□□□□ -0.14
CLDN6P56747 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
CLDN6P56747 DDX5-235ENST00000630471 473 ntTSL 4 BASIC14.19□□□□□ -0.14
CLDN6P56747 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN6P56747 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CLDN6P56747 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN6P56747 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN6P56747 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN6P56747 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN6P56747 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN6P56747 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN6P56747 AC105250.1-201ENST00000509378 2057 ntBASIC14.19□□□□□ -0.14
CLDN6P56747 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN6P56747 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CLDN6P56747 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.19□□□□□ -0.14
CLDN6P56747 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN6P56747 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN6P56747 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN6P56747 LINC01165-201ENST00000445190 1623 ntBASIC14.19□□□□□ -0.14
CLDN6P56747 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLDN6P56747 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN6P56747 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.18□□□□□ -0.14
CLDN6P56747 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN6P56747 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN6P56747 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.18□□□□□ -0.14
CLDN6P56747 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN6P56747 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
CLDN6P56747 STK26-204ENST00000481105 1835 ntTSL 2 BASIC14.18□□□□□ -0.14
CLDN6P56747 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN6P56747 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN6P56747 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN6P56747 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN6P56747 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CLDN6P56747 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN6P56747 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.18□□□□□ -0.14
CLDN6P56747 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.18□□□□□ -0.14
CLDN6P56747 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN6P56747 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN6P56747 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN6P56747 NCR3-202ENST00000376071 541 ntTSL 5 BASIC14.18□□□□□ -0.14
CLDN6P56747 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC14.18□□□□□ -0.14
CLDN6P56747 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.18□□□□□ -0.14
CLDN6P56747 RN7SL258P-201ENST00000478664 300 ntBASIC14.18□□□□□ -0.14
CLDN6P56747 NDUFS6P1-201ENST00000485187 316 ntBASIC14.18□□□□□ -0.14
CLDN6P56747 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC14.18□□□□□ -0.14
CLDN6P56747 IGHV3-37-201ENST00000518544 340 ntBASIC14.18□□□□□ -0.14
CLDN6P56747 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN6P56747 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC14.18□□□□□ -0.14
CLDN6P56747 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC14.18□□□□□ -0.14
CLDN6P56747 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC14.18□□□□□ -0.14
CLDN6P56747 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC14.18□□□□□ -0.14
CLDN6P56747 NAT9-220ENST00000582870 896 ntTSL 5 BASIC14.18□□□□□ -0.14
CLDN6P56747 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CLDN6P56747 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CLDN6P56747 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC14.18□□□□□ -0.14
CLDN6P56747 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN6P56747 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CLDN6P56747 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN6P56747 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CLDN6P56747 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms