Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
GPC3P51654 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
GPC3P51654 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
GPC3P51654 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GPC3P51654 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
GPC3P51654 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
GPC3P51654 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GPC3P51654 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GPC3P51654 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GPC3P51654 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GPC3P51654 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
GPC3P51654 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
GPC3P51654 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
GPC3P51654 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GPC3P51654 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.32■□□□□ 0.2
GPC3P51654 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GPC3P51654 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GPC3P51654 CRCP-204ENST00000398684 492 ntTSL 2 BASIC16.32■□□□□ 0.2
GPC3P51654 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GPC3P51654 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GPC3P51654 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.32■□□□□ 0.2
GPC3P51654 CYP46A4P-201ENST00000414953 267 ntBASIC16.32■□□□□ 0.2
GPC3P51654 KRTAP19-9P-201ENST00000421795 191 ntBASIC16.32■□□□□ 0.2
GPC3P51654 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
GPC3P51654 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GPC3P51654 FAM58BP-201ENST00000439056 645 ntBASIC16.32■□□□□ 0.2
GPC3P51654 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.32■□□□□ 0.2
GPC3P51654 SPTLC1P5-201ENST00000450718 252 ntBASIC16.32■□□□□ 0.2
GPC3P51654 RPL18P13-201ENST00000478088 569 ntBASIC16.32■□□□□ 0.2
GPC3P51654 TUBBP5-203ENST00000508529 1334 ntBASIC16.32■□□□□ 0.2
GPC3P51654 USP35-204ENST00000530267 2419 ntTSL 2 BASIC16.32■□□□□ 0.2
GPC3P51654 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
GPC3P51654 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC16.32■□□□□ 0.2
GPC3P51654 CSH2-206ENST00000560142 749 ntTSL 5 BASIC16.32■□□□□ 0.2
GPC3P51654 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GPC3P51654 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GPC3P51654 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
GPC3P51654 AC018529.2-202ENST00000611482 3087 ntBASIC16.32■□□□□ 0.2
GPC3P51654 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GPC3P51654 AMT-239ENST00000636865 1914 ntTSL 5 BASIC16.32■□□□□ 0.2
GPC3P51654 AC068587.10-201ENST00000641210 219 ntBASIC16.32■□□□□ 0.2
GPC3P51654 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
GPC3P51654 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GPC3P51654 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
GPC3P51654 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GPC3P51654 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
GPC3P51654 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.32■□□□□ 0.2
GPC3P51654 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
GPC3P51654 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
GPC3P51654 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GPC3P51654 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GPC3P51654 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC16.31■□□□□ 0.2
GPC3P51654 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GPC3P51654 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
GPC3P51654 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
GPC3P51654 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC16.31■□□□□ 0.2
GPC3P51654 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
GPC3P51654 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
GPC3P51654 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GPC3P51654 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
GPC3P51654 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.31■□□□□ 0.2
GPC3P51654 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
GPC3P51654 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
GPC3P51654 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
GPC3P51654 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GPC3P51654 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.31■□□□□ 0.2
GPC3P51654 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GPC3P51654 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GPC3P51654 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC16.31■□□□□ 0.2
GPC3P51654 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GPC3P51654 PUDPP3-201ENST00000445368 636 ntBASIC16.31■□□□□ 0.2
GPC3P51654 CICP12-201ENST00000455801 843 ntBASIC16.31■□□□□ 0.2
GPC3P51654 OARD1-204ENST00000464633 717 ntTSL 2 BASIC16.31■□□□□ 0.2
GPC3P51654 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC16.31■□□□□ 0.2
GPC3P51654 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC16.31■□□□□ 0.2
GPC3P51654 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GPC3P51654 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GPC3P51654 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
GPC3P51654 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GPC3P51654 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
GPC3P51654 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GPC3P51654 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GPC3P51654 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.31■□□□□ 0.2
GPC3P51654 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GPC3P51654 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
GPC3P51654 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.31■□□□□ 0.2
GPC3P51654 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
GPC3P51654 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
GPC3P51654 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC16.31■□□□□ 0.2
GPC3P51654 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC16.31■□□□□ 0.2
GPC3P51654 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GPC3P51654 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GPC3P51654 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
GPC3P51654 AC126755.1-201ENST00000525846 6405 ntBASIC16.3■□□□□ 0.2
GPC3P51654 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GPC3P51654 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GPC3P51654 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GPC3P51654 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GPC3P51654 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GPC3P51654 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms