Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
BRCC3P46736 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.69■□□□□ 0.1
BRCC3P46736 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.69■□□□□ 0.1
BRCC3P46736 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BRCC3P46736 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
BRCC3P46736 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
BRCC3P46736 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BRCC3P46736 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BRCC3P46736 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BRCC3P46736 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC15.68■□□□□ 0.1
BRCC3P46736 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
BRCC3P46736 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BRCC3P46736 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
BRCC3P46736 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BRCC3P46736 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BRCC3P46736 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BRCC3P46736 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BRCC3P46736 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.68■□□□□ 0.1
BRCC3P46736 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BRCC3P46736 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
BRCC3P46736 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
BRCC3P46736 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
BRCC3P46736 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
BRCC3P46736 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.68■□□□□ 0.1
BRCC3P46736 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.68■□□□□ 0.1
BRCC3P46736 KRT8P19-201ENST00000551916 1455 ntBASIC15.68■□□□□ 0.1
BRCC3P46736 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
BRCC3P46736 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC15.68■□□□□ 0.1
BRCC3P46736 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC15.68■□□□□ 0.1
BRCC3P46736 AC073150.1-201ENST00000450406 1084 ntBASIC15.68■□□□□ 0.1
BRCC3P46736 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC15.68■□□□□ 0.1
BRCC3P46736 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC15.68■□□□□ 0.1
BRCC3P46736 AC134698.3-201ENST00000523880 214 ntBASIC15.68■□□□□ 0.1
BRCC3P46736 AC090857.1-201ENST00000527400 390 ntBASIC15.68■□□□□ 0.1
BRCC3P46736 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC15.68■□□□□ 0.1
BRCC3P46736 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC15.68■□□□□ 0.1
BRCC3P46736 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
BRCC3P46736 AL133499.1-201ENST00000596207 608 ntBASIC15.68■□□□□ 0.1
BRCC3P46736 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC15.68■□□□□ 0.1
BRCC3P46736 AL157813.1-201ENST00000612996 587 ntBASIC15.68■□□□□ 0.1
BRCC3P46736 AC133540.1-201ENST00000620845 1019 ntBASIC15.68■□□□□ 0.1
BRCC3P46736 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BRCC3P46736 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
BRCC3P46736 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
BRCC3P46736 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BRCC3P46736 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BRCC3P46736 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.68■□□□□ 0.1
BRCC3P46736 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
BRCC3P46736 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
BRCC3P46736 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
BRCC3P46736 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
BRCC3P46736 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
BRCC3P46736 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
BRCC3P46736 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
BRCC3P46736 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
BRCC3P46736 AC139712.1-201ENST00000378256 1875 ntBASIC15.67■□□□□ 0.1
BRCC3P46736 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
BRCC3P46736 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
BRCC3P46736 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BRCC3P46736 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.67■□□□□ 0.1
BRCC3P46736 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BRCC3P46736 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.67■□□□□ 0.1
BRCC3P46736 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BRCC3P46736 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.67■□□□□ 0.1
BRCC3P46736 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
BRCC3P46736 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BRCC3P46736 AC104640.1-201ENST00000562617 2109 ntBASIC15.67■□□□□ 0.1
BRCC3P46736 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
BRCC3P46736 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BRCC3P46736 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
BRCC3P46736 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BRCC3P46736 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
BRCC3P46736 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BRCC3P46736 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.67■□□□□ 0.1
BRCC3P46736 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.67■□□□□ 0.1
BRCC3P46736 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC15.67■□□□□ 0.1
BRCC3P46736 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BRCC3P46736 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
BRCC3P46736 HLA-DQB2-229ENST00000411527 1059 ntBASIC15.67■□□□□ 0.1
BRCC3P46736 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC15.67■□□□□ 0.1
BRCC3P46736 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC15.67■□□□□ 0.1
BRCC3P46736 PDIA3P2-201ENST00000428073 158 ntBASIC15.67■□□□□ 0.1
BRCC3P46736 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
BRCC3P46736 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
BRCC3P46736 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC15.67■□□□□ 0.1
BRCC3P46736 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC15.67■□□□□ 0.1
BRCC3P46736 AC020922.3-201ENST00000595064 547 ntBASIC15.67■□□□□ 0.1
BRCC3P46736 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC15.67■□□□□ 0.1
BRCC3P46736 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC15.67■□□□□ 0.1
BRCC3P46736 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC15.67■□□□□ 0.1
BRCC3P46736 AC079336.7-201ENST00000623428 1078 ntBASIC15.67■□□□□ 0.1
BRCC3P46736 AC092299.1-201ENST00000632679 757 ntBASIC15.67■□□□□ 0.1
BRCC3P46736 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BRCC3P46736 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
BRCC3P46736 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
BRCC3P46736 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
BRCC3P46736 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
BRCC3P46736 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BRCC3P46736 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BRCC3P46736 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms