Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CD40LGP29965 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CD40LGP29965 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CD40LGP29965 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.21□□□□□ -0.3
CD40LGP29965 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC13.2□□□□□ -0.3
CD40LGP29965 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC13.2□□□□□ -0.3
CD40LGP29965 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CD40LGP29965 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
CD40LGP29965 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CD40LGP29965 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CD40LGP29965 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
CD40LGP29965 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CD40LGP29965 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC13.2□□□□□ -0.3
CD40LGP29965 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CD40LGP29965 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CD40LGP29965 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC13.2□□□□□ -0.3
CD40LGP29965 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CD40LGP29965 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CD40LGP29965 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CD40LGP29965 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
CD40LGP29965 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CD40LGP29965 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC13.2□□□□□ -0.3
CD40LGP29965 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.2□□□□□ -0.3
CD40LGP29965 FAM185BP-201ENST00000443595 716 ntBASIC13.2□□□□□ -0.3
CD40LGP29965 KRT18P3-201ENST00000451602 1288 ntBASIC13.2□□□□□ -0.3
CD40LGP29965 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CD40LGP29965 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC13.2□□□□□ -0.3
CD40LGP29965 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC13.2□□□□□ -0.3
CD40LGP29965 MAL2-202ENST00000531508 892 ntTSL 3 BASIC13.2□□□□□ -0.3
CD40LGP29965 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC13.2□□□□□ -0.3
CD40LGP29965 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC13.2□□□□□ -0.3
CD40LGP29965 CIPC-205ENST00000555437 566 ntTSL 3 BASIC13.2□□□□□ -0.3
CD40LGP29965 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC13.2□□□□□ -0.3
CD40LGP29965 AC064836.3-201ENST00000607928 673 ntBASIC13.2□□□□□ -0.3
CD40LGP29965 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
CD40LGP29965 CLK3P2-201ENST00000427566 1453 ntBASIC13.2□□□□□ -0.3
CD40LGP29965 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CD40LGP29965 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CD40LGP29965 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CD40LGP29965 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CD40LGP29965 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CD40LGP29965 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CD40LGP29965 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CD40LGP29965 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CD40LGP29965 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CD40LGP29965 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD40LGP29965 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD40LGP29965 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD40LGP29965 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.19□□□□□ -0.3
CD40LGP29965 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD40LGP29965 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD40LGP29965 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD40LGP29965 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD40LGP29965 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CD40LGP29965 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CD40LGP29965 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD40LGP29965 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD40LGP29965 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.19□□□□□ -0.3
CD40LGP29965 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD40LGP29965 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC13.19□□□□□ -0.3
CD40LGP29965 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CD40LGP29965 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD40LGP29965 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CD40LGP29965 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD40LGP29965 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD40LGP29965 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
CD40LGP29965 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD40LGP29965 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD40LGP29965 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD40LGP29965 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD40LGP29965 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD40LGP29965 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD40LGP29965 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD40LGP29965 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC13.19□□□□□ -0.3
CD40LGP29965 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC13.19□□□□□ -0.3
CD40LGP29965 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.19□□□□□ -0.3
CD40LGP29965 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC13.19□□□□□ -0.3
CD40LGP29965 NMU-203ENST00000507338 658 ntTSL 3 BASIC13.19□□□□□ -0.3
CD40LGP29965 SMN2-210ENST00000511812 867 ntTSL 2 BASIC13.19□□□□□ -0.3
CD40LGP29965 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD40LGP29965 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC13.19□□□□□ -0.3
CD40LGP29965 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC13.19□□□□□ -0.3
CD40LGP29965 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
CD40LGP29965 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CD40LGP29965 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD40LGP29965 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CD40LGP29965 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CD40LGP29965 TRIM80P-201ENST00000455685 2848 ntBASIC13.19□□□□□ -0.3
CD40LGP29965 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC13.19□□□□□ -0.3
CD40LGP29965 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD40LGP29965 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD40LGP29965 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
CD40LGP29965 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD40LGP29965 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.19□□□□□ -0.3
CD40LGP29965 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
CD40LGP29965 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CD40LGP29965 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.19□□□□□ -0.3
CD40LGP29965 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC13.19□□□□□ -0.3
CD40LGP29965 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CD40LGP29965 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms