Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ERCC2P18074 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ERCC2P18074 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ERCC2P18074 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ERCC2P18074 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ERCC2P18074 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ERCC2P18074 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.25■□□□□ 0.03
ERCC2P18074 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
ERCC2P18074 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ERCC2P18074 AC006504.5-208ENST00000588784 2401 ntBASIC15.25■□□□□ 0.03
ERCC2P18074 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ERCC2P18074 MYADML-201ENST00000474610 2147 ntBASIC15.25■□□□□ 0.03
ERCC2P18074 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
ERCC2P18074 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.25■□□□□ 0.03
ERCC2P18074 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
ERCC2P18074 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ERCC2P18074 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
ERCC2P18074 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ERCC2P18074 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ERCC2P18074 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
ERCC2P18074 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ERCC2P18074 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.25■□□□□ 0.03
ERCC2P18074 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.25■□□□□ 0.03
ERCC2P18074 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
ERCC2P18074 CNN2P10-201ENST00000443067 918 ntBASIC15.25■□□□□ 0.03
ERCC2P18074 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC15.25■□□□□ 0.03
ERCC2P18074 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.25■□□□□ 0.03
ERCC2P18074 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.25■□□□□ 0.03
ERCC2P18074 PPY2P-201ENST00000582808 702 ntBASIC15.25■□□□□ 0.03
ERCC2P18074 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ERCC2P18074 AL358472.3-201ENST00000608147 415 ntBASIC15.25■□□□□ 0.03
ERCC2P18074 ZACNP1-201ENST00000612259 710 ntBASIC15.25■□□□□ 0.03
ERCC2P18074 AC008687.7-202ENST00000637404 953 ntBASIC15.25■□□□□ 0.03
ERCC2P18074 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ERCC2P18074 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.25■□□□□ 0.03
ERCC2P18074 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ERCC2P18074 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.25■□□□□ 0.03
ERCC2P18074 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.25■□□□□ 0.03
ERCC2P18074 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.25■□□□□ 0.03
ERCC2P18074 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC15.25■□□□□ 0.03
ERCC2P18074 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ERCC2P18074 SNX18-202ENST00000343017 3140 ntBASIC15.25■□□□□ 0.03
ERCC2P18074 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.25■□□□□ 0.03
ERCC2P18074 AC139712.1-201ENST00000378256 1875 ntBASIC15.25■□□□□ 0.03
ERCC2P18074 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ERCC2P18074 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
ERCC2P18074 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.25■□□□□ 0.03
ERCC2P18074 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
ERCC2P18074 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ERCC2P18074 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ERCC2P18074 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ERCC2P18074 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ERCC2P18074 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
ERCC2P18074 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ERCC2P18074 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
ERCC2P18074 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ERCC2P18074 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ERCC2P18074 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ERCC2P18074 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ERCC2P18074 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ERCC2P18074 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
ERCC2P18074 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ERCC2P18074 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
ERCC2P18074 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.24■□□□□ 0.03
ERCC2P18074 CHMP1AP1-201ENST00000445563 662 ntBASIC15.24■□□□□ 0.03
ERCC2P18074 AC022210.1-201ENST00000449856 793 ntBASIC15.24■□□□□ 0.03
ERCC2P18074 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.24■□□□□ 0.03
ERCC2P18074 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.24■□□□□ 0.03
ERCC2P18074 AC023310.1-201ENST00000554836 735 ntBASIC15.24■□□□□ 0.03
ERCC2P18074 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC15.24■□□□□ 0.03
ERCC2P18074 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ERCC2P18074 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC15.24■□□□□ 0.03
ERCC2P18074 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ERCC2P18074 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.24■□□□□ 0.03
ERCC2P18074 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.24■□□□□ 0.03
ERCC2P18074 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC15.24■□□□□ 0.03
ERCC2P18074 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ERCC2P18074 F10-203ENST00000409306 1450 ntTSL 3 BASIC15.24■□□□□ 0.03
ERCC2P18074 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ERCC2P18074 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ERCC2P18074 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ERCC2P18074 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.24■□□□□ 0.03
ERCC2P18074 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ERCC2P18074 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.24■□□□□ 0.03
ERCC2P18074 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ERCC2P18074 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
ERCC2P18074 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ERCC2P18074 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
ERCC2P18074 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC15.24■□□□□ 0.03
ERCC2P18074 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
ERCC2P18074 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ERCC2P18074 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ERCC2P18074 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ERCC2P18074 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
ERCC2P18074 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ERCC2P18074 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
ERCC2P18074 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
ERCC2P18074 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.23■□□□□ 0.03
ERCC2P18074 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ERCC2P18074 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms