Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
CCL4P13236 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL4P13236 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL4P13236 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC13.87□□□□□ -0.19
CCL4P13236 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC13.87□□□□□ -0.19
CCL4P13236 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCL4P13236 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCL4P13236 PGAM1P5-201ENST00000548011 764 ntBASIC13.87□□□□□ -0.19
CCL4P13236 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC13.87□□□□□ -0.19
CCL4P13236 TPM1-223ENST00000560445 485 ntTSL 3 BASIC13.87□□□□□ -0.19
CCL4P13236 MIR4522-201ENST00000584932 87 ntBASIC13.87□□□□□ -0.19
CCL4P13236 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC13.87□□□□□ -0.19
CCL4P13236 AC005632.3-201ENST00000605544 308 ntBASIC13.87□□□□□ -0.19
CCL4P13236 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC13.87□□□□□ -0.19
CCL4P13236 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.87□□□□□ -0.19
CCL4P13236 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.87□□□□□ -0.19
CCL4P13236 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.87□□□□□ -0.19
CCL4P13236 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL4P13236 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
CCL4P13236 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
CCL4P13236 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CCL4P13236 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCL4P13236 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCL4P13236 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCL4P13236 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.87□□□□□ -0.19
CCL4P13236 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCL4P13236 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CCL4P13236 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC13.87□□□□□ -0.19
CCL4P13236 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC13.86□□□□□ -0.19
CCL4P13236 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CCL4P13236 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL4P13236 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL4P13236 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
CCL4P13236 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL4P13236 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL4P13236 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL4P13236 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL4P13236 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CCL4P13236 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL4P13236 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL4P13236 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL4P13236 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
CCL4P13236 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCL4P13236 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL4P13236 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCL4P13236 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
CCL4P13236 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL4P13236 MIR557-201ENST00000385239 98 ntBASIC13.86□□□□□ -0.19
CCL4P13236 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL4P13236 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC13.86□□□□□ -0.19
CCL4P13236 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCL4P13236 AL807761.2-201ENST00000422849 729 ntBASIC13.86□□□□□ -0.19
CCL4P13236 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC13.86□□□□□ -0.19
CCL4P13236 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC13.86□□□□□ -0.19
CCL4P13236 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC13.86□□□□□ -0.19
CCL4P13236 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC13.86□□□□□ -0.19
CCL4P13236 RPL7P35-201ENST00000446943 740 ntBASIC13.86□□□□□ -0.19
CCL4P13236 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCL4P13236 AC079112.1-201ENST00000454972 939 ntBASIC13.86□□□□□ -0.19
CCL4P13236 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCL4P13236 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC13.86□□□□□ -0.19
CCL4P13236 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC13.86□□□□□ -0.19
CCL4P13236 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC13.86□□□□□ -0.19
CCL4P13236 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCL4P13236 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.86□□□□□ -0.19
CCL4P13236 AC093752.3-201ENST00000567343 901 ntBASIC13.86□□□□□ -0.19
CCL4P13236 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC13.86□□□□□ -0.19
CCL4P13236 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC13.86□□□□□ -0.19
CCL4P13236 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC13.86□□□□□ -0.19
CCL4P13236 AC007326.1-201ENST00000604539 458 ntBASIC13.86□□□□□ -0.19
CCL4P13236 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
CCL4P13236 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
CCL4P13236 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL4P13236 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL4P13236 AC009093.10-201ENST00000641956 1442 ntBASIC13.86□□□□□ -0.19
CCL4P13236 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL4P13236 CICP6-201ENST00000457191 2729 ntBASIC13.86□□□□□ -0.19
CCL4P13236 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCL4P13236 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL4P13236 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCL4P13236 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCL4P13236 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCL4P13236 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.86□□□□□ -0.19
CCL4P13236 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL4P13236 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC13.86□□□□□ -0.19
CCL4P13236 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCL4P13236 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCL4P13236 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.86□□□□□ -0.19
CCL4P13236 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.86□□□□□ -0.19
CCL4P13236 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CCL4P13236 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL4P13236 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CCL4P13236 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CCL4P13236 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CCL4P13236 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CCL4P13236 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCL4P13236 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.85□□□□□ -0.19
CCL4P13236 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.85□□□□□ -0.19
CCL4P13236 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCL4P13236 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms