Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.69□□□□□ -0.06
COL6A2P12110 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL6A2P12110 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL6A2P12110 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL6A2P12110 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL6A2P12110 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL6A2P12110 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL6A2P12110 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
COL6A2P12110 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
COL6A2P12110 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL6A2P12110 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL6A2P12110 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.69□□□□□ -0.06
COL6A2P12110 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL6A2P12110 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
COL6A2P12110 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL6A2P12110 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.69□□□□□ -0.06
COL6A2P12110 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL6A2P12110 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.69□□□□□ -0.06
COL6A2P12110 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.69□□□□□ -0.06
COL6A2P12110 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.69□□□□□ -0.06
COL6A2P12110 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.69□□□□□ -0.06
COL6A2P12110 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.69□□□□□ -0.06
COL6A2P12110 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.69□□□□□ -0.06
COL6A2P12110 AC133539.2-201ENST00000604757 467 ntBASIC14.69□□□□□ -0.06
COL6A2P12110 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.69□□□□□ -0.06
COL6A2P12110 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL6A2P12110 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
COL6A2P12110 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.69□□□□□ -0.06
COL6A2P12110 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL6A2P12110 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
COL6A2P12110 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
COL6A2P12110 AL391825.1-201ENST00000457671 1364 ntBASIC14.69□□□□□ -0.06
COL6A2P12110 AC015688.4-201ENST00000580780 1647 ntBASIC14.69□□□□□ -0.06
COL6A2P12110 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.69□□□□□ -0.06
COL6A2P12110 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
COL6A2P12110 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL6A2P12110 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.69□□□□□ -0.06
COL6A2P12110 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL6A2P12110 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL6A2P12110 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.69□□□□□ -0.06
COL6A2P12110 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
COL6A2P12110 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL6A2P12110 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
COL6A2P12110 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
COL6A2P12110 AC012617.1-204ENST00000586340 2305 ntBASIC14.69□□□□□ -0.06
COL6A2P12110 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
COL6A2P12110 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.68□□□□□ -0.06
COL6A2P12110 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL6A2P12110 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL6A2P12110 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
COL6A2P12110 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL6A2P12110 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
COL6A2P12110 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL6A2P12110 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.68□□□□□ -0.06
COL6A2P12110 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL6A2P12110 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.68□□□□□ -0.06
COL6A2P12110 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
COL6A2P12110 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.68□□□□□ -0.06
COL6A2P12110 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.68□□□□□ -0.06
COL6A2P12110 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL6A2P12110 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
COL6A2P12110 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL6A2P12110 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
COL6A2P12110 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
COL6A2P12110 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
COL6A2P12110 DFFBP1-201ENST00000433250 979 ntBASIC14.68□□□□□ -0.06
COL6A2P12110 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.68□□□□□ -0.06
COL6A2P12110 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.68□□□□□ -0.06
COL6A2P12110 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.68□□□□□ -0.06
COL6A2P12110 KRT18P25-201ENST00000508931 1278 ntBASIC14.68□□□□□ -0.06
COL6A2P12110 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.68□□□□□ -0.06
COL6A2P12110 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.68□□□□□ -0.06
COL6A2P12110 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
COL6A2P12110 AC103988.2-201ENST00000561804 725 ntBASIC14.68□□□□□ -0.06
COL6A2P12110 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.68□□□□□ -0.06
COL6A2P12110 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
COL6A2P12110 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.68□□□□□ -0.06
COL6A2P12110 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL6A2P12110 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.68□□□□□ -0.06
COL6A2P12110 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
COL6A2P12110 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL6A2P12110 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL6A2P12110 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.68□□□□□ -0.06
COL6A2P12110 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
COL6A2P12110 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
COL6A2P12110 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL6A2P12110 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL6A2P12110 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL6A2P12110 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
COL6A2P12110 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC14.68□□□□□ -0.06
COL6A2P12110 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
COL6A2P12110 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL6A2P12110 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
COL6A2P12110 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
COL6A2P12110 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
COL6A2P12110 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
COL6A2P12110 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.67□□□□□ -0.06
COL6A2P12110 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
COL6A2P12110 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
COL6A2P12110 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms