Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTNND1O60716 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC17.22■□□□□ 0.35
CTNND1O60716 BANF1P3-201ENST00000412556 261 ntBASIC17.22■□□□□ 0.35
CTNND1O60716 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CTNND1O60716 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CTNND1O60716 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC17.22■□□□□ 0.35
CTNND1O60716 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
CTNND1O60716 TPM1-223ENST00000560445 485 ntTSL 3 BASIC17.22■□□□□ 0.35
CTNND1O60716 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC17.22■□□□□ 0.35
CTNND1O60716 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC17.22■□□□□ 0.35
CTNND1O60716 YRDCP1-201ENST00000621419 643 ntBASIC17.22■□□□□ 0.35
CTNND1O60716 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CTNND1O60716 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CTNND1O60716 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTNND1O60716 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTNND1O60716 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTNND1O60716 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTNND1O60716 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTNND1O60716 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CTNND1O60716 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC17.22■□□□□ 0.35
CTNND1O60716 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
CTNND1O60716 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTNND1O60716 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC17.22■□□□□ 0.35
CTNND1O60716 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CTNND1O60716 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTNND1O60716 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC17.22■□□□□ 0.35
CTNND1O60716 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC17.22■□□□□ 0.35
CTNND1O60716 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC17.22■□□□□ 0.35
CTNND1O60716 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTNND1O60716 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CTNND1O60716 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
CTNND1O60716 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC17.21■□□□□ 0.35
CTNND1O60716 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CTNND1O60716 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTNND1O60716 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTNND1O60716 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC17.21■□□□□ 0.35
CTNND1O60716 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTNND1O60716 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTNND1O60716 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC17.21■□□□□ 0.35
CTNND1O60716 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC17.21■□□□□ 0.35
CTNND1O60716 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC17.21■□□□□ 0.35
CTNND1O60716 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.21■□□□□ 0.35
CTNND1O60716 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTNND1O60716 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
CTNND1O60716 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC17.21■□□□□ 0.35
CTNND1O60716 RPS9P1-201ENST00000419943 583 ntBASIC17.21■□□□□ 0.35
CTNND1O60716 HPGD-203ENST00000422112 805 ntTSL 2 BASIC17.21■□□□□ 0.35
CTNND1O60716 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CTNND1O60716 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC17.21■□□□□ 0.35
CTNND1O60716 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC17.21■□□□□ 0.35
CTNND1O60716 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC17.21■□□□□ 0.35
CTNND1O60716 AL031713.1-201ENST00000564813 661 ntBASIC17.21■□□□□ 0.35
CTNND1O60716 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC17.21■□□□□ 0.35
CTNND1O60716 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
CTNND1O60716 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC17.21■□□□□ 0.35
CTNND1O60716 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CTNND1O60716 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC17.21■□□□□ 0.35
CTNND1O60716 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTNND1O60716 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTNND1O60716 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTNND1O60716 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CTNND1O60716 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTNND1O60716 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTNND1O60716 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC17.21■□□□□ 0.35
CTNND1O60716 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC17.21■□□□□ 0.35
CTNND1O60716 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CTNND1O60716 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC17.21■□□□□ 0.35
CTNND1O60716 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CTNND1O60716 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CTNND1O60716 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC17.21■□□□□ 0.34
CTNND1O60716 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CTNND1O60716 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTNND1O60716 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
CTNND1O60716 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC17.2■□□□□ 0.34
CTNND1O60716 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTNND1O60716 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CTNND1O60716 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTNND1O60716 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTNND1O60716 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC17.2■□□□□ 0.34
CTNND1O60716 AL590440.2-201ENST00000641973 1595 ntBASIC17.2■□□□□ 0.34
CTNND1O60716 R3HDM2P2-201ENST00000401880 2116 ntBASIC17.2■□□□□ 0.34
CTNND1O60716 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC17.2■□□□□ 0.34
CTNND1O60716 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTNND1O60716 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CTNND1O60716 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTNND1O60716 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CTNND1O60716 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC17.2■□□□□ 0.34
CTNND1O60716 AP000356.3-201ENST00000382243 753 ntBASIC17.2■□□□□ 0.34
CTNND1O60716 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CTNND1O60716 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC17.2■□□□□ 0.34
CTNND1O60716 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC17.2■□□□□ 0.34
CTNND1O60716 AP000358.1-201ENST00000456260 156 ntBASIC17.2■□□□□ 0.34
CTNND1O60716 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC17.2■□□□□ 0.34
CTNND1O60716 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC17.2■□□□□ 0.34
CTNND1O60716 AC003686.1-201ENST00000550956 1034 ntBASIC17.2■□□□□ 0.34
CTNND1O60716 FOS-204ENST00000554617 796 ntTSL 2 BASIC17.2■□□□□ 0.34
CTNND1O60716 DNM1P30-201ENST00000563586 452 ntBASIC17.2■□□□□ 0.34
CTNND1O60716 MIR6842-201ENST00000612539 65 ntBASIC17.2■□□□□ 0.34
CTNND1O60716 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CTNND1O60716 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms