Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SSSCA1O60232 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SSSCA1O60232 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SSSCA1O60232 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SSSCA1O60232 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
SSSCA1O60232 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SSSCA1O60232 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SSSCA1O60232 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
SSSCA1O60232 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SSSCA1O60232 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SSSCA1O60232 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
SSSCA1O60232 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC12.16□□□□□ -0.46
SSSCA1O60232 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SSSCA1O60232 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
SSSCA1O60232 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
SSSCA1O60232 YBX2P1-201ENST00000394192 760 ntBASIC12.16□□□□□ -0.46
SSSCA1O60232 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC12.16□□□□□ -0.46
SSSCA1O60232 AL591424.1-201ENST00000442569 1213 ntBASIC12.16□□□□□ -0.46
SSSCA1O60232 KRT18P3-201ENST00000451602 1288 ntBASIC12.16□□□□□ -0.46
SSSCA1O60232 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC12.16□□□□□ -0.46
SSSCA1O60232 RPL18-209ENST00000550645 463 ntTSL 5 BASIC12.16□□□□□ -0.46
SSSCA1O60232 RPL18-214ENST00000552588 559 ntTSL 3 BASIC12.16□□□□□ -0.46
SSSCA1O60232 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC12.16□□□□□ -0.46
SSSCA1O60232 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
SSSCA1O60232 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
SSSCA1O60232 MIR193BHG-211ENST00000641433 5365 ntBASIC12.16□□□□□ -0.46
SSSCA1O60232 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SSSCA1O60232 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SSSCA1O60232 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.16□□□□□ -0.46
SSSCA1O60232 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
SSSCA1O60232 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SSSCA1O60232 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SSSCA1O60232 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
SSSCA1O60232 NUTM2HP-201ENST00000442076 2498 ntBASIC12.16□□□□□ -0.46
SSSCA1O60232 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC12.16□□□□□ -0.46
SSSCA1O60232 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SSSCA1O60232 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SSSCA1O60232 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SSSCA1O60232 ZNF259P1-201ENST00000407656 1365 ntBASIC12.16□□□□□ -0.46
SSSCA1O60232 AL035456.1-201ENST00000456064 1369 ntBASIC12.16□□□□□ -0.46
SSSCA1O60232 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.16□□□□□ -0.46
SSSCA1O60232 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC12.16□□□□□ -0.46
SSSCA1O60232 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
SSSCA1O60232 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SSSCA1O60232 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SSSCA1O60232 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
SSSCA1O60232 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
SSSCA1O60232 Z82170.1-201ENST00000625081 3192 ntBASIC12.16□□□□□ -0.46
SSSCA1O60232 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
SSSCA1O60232 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SSSCA1O60232 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SSSCA1O60232 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
SSSCA1O60232 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
SSSCA1O60232 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SSSCA1O60232 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SSSCA1O60232 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC12.15□□□□□ -0.46
SSSCA1O60232 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC12.15□□□□□ -0.46
SSSCA1O60232 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SSSCA1O60232 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
SSSCA1O60232 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC12.15□□□□□ -0.46
SSSCA1O60232 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SSSCA1O60232 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC12.15□□□□□ -0.46
SSSCA1O60232 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC12.15□□□□□ -0.46
SSSCA1O60232 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SSSCA1O60232 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SSSCA1O60232 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SSSCA1O60232 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SSSCA1O60232 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
SSSCA1O60232 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
SSSCA1O60232 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
SSSCA1O60232 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SSSCA1O60232 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SSSCA1O60232 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SSSCA1O60232 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SSSCA1O60232 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SSSCA1O60232 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
SSSCA1O60232 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC12.15□□□□□ -0.46
SSSCA1O60232 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
SSSCA1O60232 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC12.15□□□□□ -0.46
SSSCA1O60232 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SSSCA1O60232 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SSSCA1O60232 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SSSCA1O60232 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
SSSCA1O60232 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SSSCA1O60232 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SSSCA1O60232 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
SSSCA1O60232 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SSSCA1O60232 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
SSSCA1O60232 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
SSSCA1O60232 KRT18P32-201ENST00000424695 1287 ntBASIC12.15□□□□□ -0.46
SSSCA1O60232 AC005237.2-201ENST00000434368 219 ntBASIC12.15□□□□□ -0.46
SSSCA1O60232 RPL13P2-201ENST00000440687 659 ntBASIC12.15□□□□□ -0.46
SSSCA1O60232 SERBP1P3-201ENST00000459980 809 ntBASIC12.15□□□□□ -0.46
SSSCA1O60232 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC12.15□□□□□ -0.46
SSSCA1O60232 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC12.15□□□□□ -0.46
SSSCA1O60232 TSFM-210ENST00000550559 897 ntTSL 5 BASIC12.15□□□□□ -0.46
SSSCA1O60232 AL079307.3-201ENST00000556114 283 ntBASIC12.15□□□□□ -0.46
SSSCA1O60232 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SSSCA1O60232 AC025048.3-201ENST00000590609 569 ntBASIC12.15□□□□□ -0.46
SSSCA1O60232 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC12.15□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms