Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.55□□□□□ -0.24
NPIPA3F8WFD2 AP003171.2-201ENST00000528208 925 ntBASIC13.55□□□□□ -0.24
NPIPA3F8WFD2 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA3F8WFD2 IGHV3OR16-16-201ENST00000563644 343 ntBASIC13.55□□□□□ -0.24
NPIPA3F8WFD2 AC020914.3-201ENST00000594712 304 ntBASIC13.55□□□□□ -0.24
NPIPA3F8WFD2 AC007663.3-201ENST00000609632 465 ntBASIC13.55□□□□□ -0.24
NPIPA3F8WFD2 AC068587.10-201ENST00000641210 219 ntBASIC13.55□□□□□ -0.24
NPIPA3F8WFD2 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.55□□□□□ -0.24
NPIPA3F8WFD2 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA3F8WFD2 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA3F8WFD2 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.55□□□□□ -0.24
NPIPA3F8WFD2 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA3F8WFD2 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA3F8WFD2 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA3F8WFD2 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.55□□□□□ -0.24
NPIPA3F8WFD2 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA3F8WFD2 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA3F8WFD2 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.55□□□□□ -0.24
NPIPA3F8WFD2 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA3F8WFD2 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA3F8WFD2 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA3F8WFD2 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA3F8WFD2 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA3F8WFD2 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA3F8WFD2 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.55□□□□□ -0.24
NPIPA3F8WFD2 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA3F8WFD2 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA3F8WFD2 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA3F8WFD2 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NPIPA3F8WFD2 AC018735.1-201ENST00000437208 1502 ntBASIC13.54□□□□□ -0.24
NPIPA3F8WFD2 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.54□□□□□ -0.24
NPIPA3F8WFD2 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA3F8WFD2 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA3F8WFD2 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
NPIPA3F8WFD2 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.54□□□□□ -0.24
NPIPA3F8WFD2 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA3F8WFD2 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA3F8WFD2 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA3F8WFD2 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.54□□□□□ -0.24
NPIPA3F8WFD2 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.54□□□□□ -0.24
NPIPA3F8WFD2 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA3F8WFD2 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA3F8WFD2 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA3F8WFD2 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA3F8WFD2 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.54□□□□□ -0.24
NPIPA3F8WFD2 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA3F8WFD2 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC13.54□□□□□ -0.24
NPIPA3F8WFD2 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA3F8WFD2 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.54□□□□□ -0.24
NPIPA3F8WFD2 CALR4P-201ENST00000431943 946 ntBASIC13.54□□□□□ -0.24
NPIPA3F8WFD2 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC13.54□□□□□ -0.24
NPIPA3F8WFD2 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC13.54□□□□□ -0.24
NPIPA3F8WFD2 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA3F8WFD2 AKR7A2P1-201ENST00000460134 915 ntBASIC13.54□□□□□ -0.24
NPIPA3F8WFD2 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC13.54□□□□□ -0.24
NPIPA3F8WFD2 MESTP3-201ENST00000503460 968 ntBASIC13.54□□□□□ -0.24
NPIPA3F8WFD2 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC13.54□□□□□ -0.24
NPIPA3F8WFD2 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.54□□□□□ -0.24
NPIPA3F8WFD2 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC13.54□□□□□ -0.24
NPIPA3F8WFD2 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.54□□□□□ -0.24
NPIPA3F8WFD2 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.54□□□□□ -0.24
NPIPA3F8WFD2 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC13.54□□□□□ -0.24
NPIPA3F8WFD2 DIO1-215ENST00000610607 796 ntTSL 5 BASIC13.54□□□□□ -0.24
NPIPA3F8WFD2 AP001002.3-201ENST00000623482 206 ntBASIC13.54□□□□□ -0.24
NPIPA3F8WFD2 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC13.54□□□□□ -0.24
NPIPA3F8WFD2 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA3F8WFD2 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA3F8WFD2 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA3F8WFD2 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA3F8WFD2 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.54□□□□□ -0.24
NPIPA3F8WFD2 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA3F8WFD2 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA3F8WFD2 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.54□□□□□ -0.24
NPIPA3F8WFD2 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA3F8WFD2 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.54□□□□□ -0.24
NPIPA3F8WFD2 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA3F8WFD2 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA3F8WFD2 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA3F8WFD2 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.54□□□□□ -0.24
NPIPA3F8WFD2 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.54□□□□□ -0.24
NPIPA3F8WFD2 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA3F8WFD2 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA3F8WFD2 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA3F8WFD2 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA3F8WFD2 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA3F8WFD2 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA3F8WFD2 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
NPIPA3F8WFD2 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA3F8WFD2 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NPIPA3F8WFD2 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA3F8WFD2 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA3F8WFD2 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA3F8WFD2 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA3F8WFD2 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA3F8WFD2 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA3F8WFD2 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA3F8WFD2 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA3F8WFD2 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
NPIPA3F8WFD2 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NPIPA3F8WFD2 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms