Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
PCDHB7Q9Y5E2 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
PCDHB7Q9Y5E2 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHB7Q9Y5E2 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHB7Q9Y5E2 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.86■□□□□ 0.13
PCDHB7Q9Y5E2 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.86■□□□□ 0.13
PCDHB7Q9Y5E2 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHB7Q9Y5E2 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PCDHB7Q9Y5E2 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHB7Q9Y5E2 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHB7Q9Y5E2 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHB7Q9Y5E2 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHB7Q9Y5E2 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHB7Q9Y5E2 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHB7Q9Y5E2 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHB7Q9Y5E2 AC092135.3-201ENST00000624151 1846 ntBASIC15.85■□□□□ 0.13
PCDHB7Q9Y5E2 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.85■□□□□ 0.13
PCDHB7Q9Y5E2 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
PCDHB7Q9Y5E2 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHB7Q9Y5E2 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHB7Q9Y5E2 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHB7Q9Y5E2 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHB7Q9Y5E2 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHB7Q9Y5E2 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHB7Q9Y5E2 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHB7Q9Y5E2 AP000358.1-201ENST00000456260 156 ntBASIC15.85■□□□□ 0.13
PCDHB7Q9Y5E2 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC15.85■□□□□ 0.13
PCDHB7Q9Y5E2 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC15.85■□□□□ 0.13
PCDHB7Q9Y5E2 AL031713.1-201ENST00000564813 661 ntBASIC15.85■□□□□ 0.13
PCDHB7Q9Y5E2 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
PCDHB7Q9Y5E2 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC15.85■□□□□ 0.13
PCDHB7Q9Y5E2 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC15.85■□□□□ 0.13
PCDHB7Q9Y5E2 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC15.85■□□□□ 0.13
PCDHB7Q9Y5E2 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC15.85■□□□□ 0.13
PCDHB7Q9Y5E2 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC15.85■□□□□ 0.13
PCDHB7Q9Y5E2 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHB7Q9Y5E2 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHB7Q9Y5E2 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.85■□□□□ 0.13
PCDHB7Q9Y5E2 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHB7Q9Y5E2 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
PCDHB7Q9Y5E2 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
PCDHB7Q9Y5E2 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PCDHB7Q9Y5E2 AC009093.10-201ENST00000641956 1442 ntBASIC15.85■□□□□ 0.13
PCDHB7Q9Y5E2 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHB7Q9Y5E2 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHB7Q9Y5E2 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHB7Q9Y5E2 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.84■□□□□ 0.13
PCDHB7Q9Y5E2 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
PCDHB7Q9Y5E2 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHB7Q9Y5E2 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.84■□□□□ 0.13
PCDHB7Q9Y5E2 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHB7Q9Y5E2 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHB7Q9Y5E2 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHB7Q9Y5E2 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC15.84■□□□□ 0.13
PCDHB7Q9Y5E2 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
PCDHB7Q9Y5E2 AL583805.1-201ENST00000391389 531 ntBASIC15.84■□□□□ 0.13
PCDHB7Q9Y5E2 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHB7Q9Y5E2 KRT18P36-201ENST00000411618 1276 ntBASIC15.84■□□□□ 0.13
PCDHB7Q9Y5E2 BANF1P3-201ENST00000412556 261 ntBASIC15.84■□□□□ 0.13
PCDHB7Q9Y5E2 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHB7Q9Y5E2 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHB7Q9Y5E2 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC15.84■□□□□ 0.13
PCDHB7Q9Y5E2 RPL7P35-201ENST00000446943 740 ntBASIC15.84■□□□□ 0.13
PCDHB7Q9Y5E2 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
PCDHB7Q9Y5E2 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHB7Q9Y5E2 RN7SL8P-201ENST00000461771 266 ntBASIC15.84■□□□□ 0.13
PCDHB7Q9Y5E2 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC15.84■□□□□ 0.13
PCDHB7Q9Y5E2 NPM1P43-201ENST00000558669 786 ntBASIC15.84■□□□□ 0.13
PCDHB7Q9Y5E2 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC15.84■□□□□ 0.13
PCDHB7Q9Y5E2 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.84■□□□□ 0.13
PCDHB7Q9Y5E2 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.84■□□□□ 0.13
PCDHB7Q9Y5E2 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.84■□□□□ 0.13
PCDHB7Q9Y5E2 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
PCDHB7Q9Y5E2 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
PCDHB7Q9Y5E2 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHB7Q9Y5E2 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC15.84■□□□□ 0.13
PCDHB7Q9Y5E2 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHB7Q9Y5E2 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
PCDHB7Q9Y5E2 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
PCDHB7Q9Y5E2 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
PCDHB7Q9Y5E2 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC15.83■□□□□ 0.13
PCDHB7Q9Y5E2 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PCDHB7Q9Y5E2 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.83■□□□□ 0.13
PCDHB7Q9Y5E2 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHB7Q9Y5E2 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHB7Q9Y5E2 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.83■□□□□ 0.12
PCDHB7Q9Y5E2 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHB7Q9Y5E2 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.83■□□□□ 0.12
PCDHB7Q9Y5E2 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHB7Q9Y5E2 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC15.83■□□□□ 0.12
PCDHB7Q9Y5E2 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHB7Q9Y5E2 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHB7Q9Y5E2 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
PCDHB7Q9Y5E2 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC15.83■□□□□ 0.12
PCDHB7Q9Y5E2 RPSAP31-201ENST00000416648 895 ntBASIC15.83■□□□□ 0.12
PCDHB7Q9Y5E2 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHB7Q9Y5E2 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHB7Q9Y5E2 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC15.83■□□□□ 0.12
PCDHB7Q9Y5E2 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC15.83■□□□□ 0.12
PCDHB7Q9Y5E2 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms