Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
SYNPO2Q9UMS6 RPSAP15-201ENST00000448168 861 ntBASIC16.86■□□□□ 0.29
SYNPO2Q9UMS6 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC16.86■□□□□ 0.29
SYNPO2Q9UMS6 AC130709.1-201ENST00000484779 1212 ntBASIC16.86■□□□□ 0.29
SYNPO2Q9UMS6 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SYNPO2Q9UMS6 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC16.86■□□□□ 0.29
SYNPO2Q9UMS6 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC16.86■□□□□ 0.29
SYNPO2Q9UMS6 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
SYNPO2Q9UMS6 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SYNPO2Q9UMS6 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC16.86■□□□□ 0.29
SYNPO2Q9UMS6 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SYNPO2Q9UMS6 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SYNPO2Q9UMS6 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SYNPO2Q9UMS6 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
SYNPO2Q9UMS6 AC215219.1-201ENST00000400706 1817 ntBASIC16.86■□□□□ 0.29
SYNPO2Q9UMS6 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SYNPO2Q9UMS6 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SYNPO2Q9UMS6 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC16.86■□□□□ 0.29
SYNPO2Q9UMS6 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
SYNPO2Q9UMS6 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SYNPO2Q9UMS6 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SYNPO2Q9UMS6 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SYNPO2Q9UMS6 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC16.86■□□□□ 0.29
SYNPO2Q9UMS6 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC16.86■□□□□ 0.29
SYNPO2Q9UMS6 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SYNPO2Q9UMS6 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
SYNPO2Q9UMS6 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SYNPO2Q9UMS6 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SYNPO2Q9UMS6 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SYNPO2Q9UMS6 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SYNPO2Q9UMS6 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SYNPO2Q9UMS6 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC16.85■□□□□ 0.29
SYNPO2Q9UMS6 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC16.85■□□□□ 0.29
SYNPO2Q9UMS6 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SYNPO2Q9UMS6 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SYNPO2Q9UMS6 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
SYNPO2Q9UMS6 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
SYNPO2Q9UMS6 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SYNPO2Q9UMS6 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
SYNPO2Q9UMS6 MIR557-201ENST00000385239 98 ntBASIC16.85■□□□□ 0.29
SYNPO2Q9UMS6 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC16.85■□□□□ 0.29
SYNPO2Q9UMS6 AC092580.1-201ENST00000433998 658 ntBASIC16.85■□□□□ 0.29
SYNPO2Q9UMS6 DUTP3-201ENST00000450025 415 ntBASIC16.85■□□□□ 0.29
SYNPO2Q9UMS6 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC16.85■□□□□ 0.29
SYNPO2Q9UMS6 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC16.85■□□□□ 0.29
SYNPO2Q9UMS6 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SYNPO2Q9UMS6 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC16.85■□□□□ 0.29
SYNPO2Q9UMS6 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC16.85■□□□□ 0.29
SYNPO2Q9UMS6 MIR3677-201ENST00000578964 60 ntBASIC16.85■□□□□ 0.29
SYNPO2Q9UMS6 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SYNPO2Q9UMS6 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SYNPO2Q9UMS6 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SYNPO2Q9UMS6 AC103691.2-201ENST00000618824 433 ntBASIC16.85■□□□□ 0.29
SYNPO2Q9UMS6 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SYNPO2Q9UMS6 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SYNPO2Q9UMS6 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SYNPO2Q9UMS6 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC16.85■□□□□ 0.29
SYNPO2Q9UMS6 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SYNPO2Q9UMS6 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SYNPO2Q9UMS6 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SYNPO2Q9UMS6 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SYNPO2Q9UMS6 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SYNPO2Q9UMS6 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SYNPO2Q9UMS6 MPI-203ENST00000535694 1523 ntTSL 2 BASIC16.85■□□□□ 0.29
SYNPO2Q9UMS6 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC16.85■□□□□ 0.29
SYNPO2Q9UMS6 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.85■□□□□ 0.29
SYNPO2Q9UMS6 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SYNPO2Q9UMS6 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
SYNPO2Q9UMS6 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SYNPO2Q9UMS6 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.84■□□□□ 0.29
SYNPO2Q9UMS6 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SYNPO2Q9UMS6 AC015909.3-201ENST00000572855 1794 ntBASIC16.84■□□□□ 0.29
SYNPO2Q9UMS6 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SYNPO2Q9UMS6 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SYNPO2Q9UMS6 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SYNPO2Q9UMS6 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
SYNPO2Q9UMS6 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC16.84■□□□□ 0.29
SYNPO2Q9UMS6 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SYNPO2Q9UMS6 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC16.84■□□□□ 0.29
SYNPO2Q9UMS6 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC16.84■□□□□ 0.29
SYNPO2Q9UMS6 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC16.84■□□□□ 0.29
SYNPO2Q9UMS6 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC16.84■□□□□ 0.29
SYNPO2Q9UMS6 DUX4L50-201ENST00000455245 715 ntBASIC16.84■□□□□ 0.29
SYNPO2Q9UMS6 AC022447.6-201ENST00000515522 438 ntBASIC16.84■□□□□ 0.29
SYNPO2Q9UMS6 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SYNPO2Q9UMS6 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC16.84■□□□□ 0.29
SYNPO2Q9UMS6 KRT8P1-201ENST00000557533 1207 ntBASIC16.84■□□□□ 0.29
SYNPO2Q9UMS6 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC16.84■□□□□ 0.29
SYNPO2Q9UMS6 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC16.84■□□□□ 0.29
SYNPO2Q9UMS6 KRT18P9-201ENST00000604826 1300 ntBASIC16.84■□□□□ 0.29
SYNPO2Q9UMS6 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC16.84■□□□□ 0.29
SYNPO2Q9UMS6 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SYNPO2Q9UMS6 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC16.84■□□□□ 0.29
SYNPO2Q9UMS6 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
SYNPO2Q9UMS6 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SYNPO2Q9UMS6 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SYNPO2Q9UMS6 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SYNPO2Q9UMS6 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SYNPO2Q9UMS6 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SYNPO2Q9UMS6 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms