Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
BLOC1S4Q9NUP1 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC16.41■□□□□ 0.22
BLOC1S4Q9NUP1 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC16.41■□□□□ 0.22
BLOC1S4Q9NUP1 OS9-204ENST00000389146 2091 ntTSL 2 BASIC16.41■□□□□ 0.22
BLOC1S4Q9NUP1 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
BLOC1S4Q9NUP1 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
BLOC1S4Q9NUP1 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
BLOC1S4Q9NUP1 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
BLOC1S4Q9NUP1 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BLOC1S4Q9NUP1 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
BLOC1S4Q9NUP1 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC16.41■□□□□ 0.22
BLOC1S4Q9NUP1 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC16.41■□□□□ 0.22
BLOC1S4Q9NUP1 TISP43-201ENST00000409793 538 ntTSL 4 BASIC16.41■□□□□ 0.22
BLOC1S4Q9NUP1 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
BLOC1S4Q9NUP1 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC16.41■□□□□ 0.22
BLOC1S4Q9NUP1 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC16.41■□□□□ 0.22
BLOC1S4Q9NUP1 IGHV3-71-201ENST00000523324 359 ntBASIC16.41■□□□□ 0.22
BLOC1S4Q9NUP1 MFF-223ENST00000524634 647 ntTSL 2 BASIC16.41■□□□□ 0.22
BLOC1S4Q9NUP1 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC16.41■□□□□ 0.22
BLOC1S4Q9NUP1 RNF41-210ENST00000552244 716 ntTSL 3 BASIC16.41■□□□□ 0.22
BLOC1S4Q9NUP1 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BLOC1S4Q9NUP1 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC16.41■□□□□ 0.22
BLOC1S4Q9NUP1 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC16.41■□□□□ 0.22
BLOC1S4Q9NUP1 AC009955.4-201ENST00000597192 544 ntBASIC16.41■□□□□ 0.22
BLOC1S4Q9NUP1 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BLOC1S4Q9NUP1 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
BLOC1S4Q9NUP1 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
BLOC1S4Q9NUP1 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BLOC1S4Q9NUP1 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BLOC1S4Q9NUP1 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.41■□□□□ 0.22
BLOC1S4Q9NUP1 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BLOC1S4Q9NUP1 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
BLOC1S4Q9NUP1 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC16.41■□□□□ 0.22
BLOC1S4Q9NUP1 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
BLOC1S4Q9NUP1 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC16.41■□□□□ 0.22
BLOC1S4Q9NUP1 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.41■□□□□ 0.22
BLOC1S4Q9NUP1 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BLOC1S4Q9NUP1 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
BLOC1S4Q9NUP1 AC068587.6-202ENST00000641839 5619 ntBASIC16.41■□□□□ 0.22
BLOC1S4Q9NUP1 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BLOC1S4Q9NUP1 CICP16-201ENST00000502609 2813 ntBASIC16.41■□□□□ 0.22
BLOC1S4Q9NUP1 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BLOC1S4Q9NUP1 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BLOC1S4Q9NUP1 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BLOC1S4Q9NUP1 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
BLOC1S4Q9NUP1 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
BLOC1S4Q9NUP1 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC16.4■□□□□ 0.22
BLOC1S4Q9NUP1 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC16.4■□□□□ 0.22
BLOC1S4Q9NUP1 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
BLOC1S4Q9NUP1 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
BLOC1S4Q9NUP1 AC136759.1-202ENST00000530858 2194 ntBASIC16.4■□□□□ 0.22
BLOC1S4Q9NUP1 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
BLOC1S4Q9NUP1 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC16.4■□□□□ 0.22
BLOC1S4Q9NUP1 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
BLOC1S4Q9NUP1 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
BLOC1S4Q9NUP1 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
BLOC1S4Q9NUP1 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
BLOC1S4Q9NUP1 AK6-201ENST00000380818 1183 ntTSL 2 BASIC16.4■□□□□ 0.22
BLOC1S4Q9NUP1 MIR658-201ENST00000385210 100 ntBASIC16.4■□□□□ 0.22
BLOC1S4Q9NUP1 PTPA-215ENST00000432124 567 ntTSL 4 BASIC16.4■□□□□ 0.22
BLOC1S4Q9NUP1 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
BLOC1S4Q9NUP1 KRT223P-202ENST00000449164 1292 ntBASIC16.4■□□□□ 0.22
BLOC1S4Q9NUP1 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC16.4■□□□□ 0.22
BLOC1S4Q9NUP1 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
BLOC1S4Q9NUP1 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
BLOC1S4Q9NUP1 AC132192.2-201ENST00000596206 1147 ntBASIC16.4■□□□□ 0.22
BLOC1S4Q9NUP1 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
BLOC1S4Q9NUP1 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC16.4■□□□□ 0.22
BLOC1S4Q9NUP1 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
BLOC1S4Q9NUP1 AC020910.6-201ENST00000623084 1459 ntBASIC16.4■□□□□ 0.22
BLOC1S4Q9NUP1 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
BLOC1S4Q9NUP1 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
BLOC1S4Q9NUP1 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
BLOC1S4Q9NUP1 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
BLOC1S4Q9NUP1 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
BLOC1S4Q9NUP1 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
BLOC1S4Q9NUP1 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
BLOC1S4Q9NUP1 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BLOC1S4Q9NUP1 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BLOC1S4Q9NUP1 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
BLOC1S4Q9NUP1 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BLOC1S4Q9NUP1 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
BLOC1S4Q9NUP1 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
BLOC1S4Q9NUP1 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BLOC1S4Q9NUP1 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
BLOC1S4Q9NUP1 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BLOC1S4Q9NUP1 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BLOC1S4Q9NUP1 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
BLOC1S4Q9NUP1 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC16.39■□□□□ 0.21
BLOC1S4Q9NUP1 AC009093.10-201ENST00000641956 1442 ntBASIC16.39■□□□□ 0.21
BLOC1S4Q9NUP1 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
BLOC1S4Q9NUP1 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BLOC1S4Q9NUP1 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
BLOC1S4Q9NUP1 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
BLOC1S4Q9NUP1 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
BLOC1S4Q9NUP1 OR8S1-201ENST00000310194 1080 ntBASIC16.39■□□□□ 0.21
BLOC1S4Q9NUP1 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
BLOC1S4Q9NUP1 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
BLOC1S4Q9NUP1 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
BLOC1S4Q9NUP1 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms