Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC15.3■□□□□ 0.04
RPRD1AQ96P16 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RPRD1AQ96P16 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.3■□□□□ 0.04
RPRD1AQ96P16 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.3■□□□□ 0.04
RPRD1AQ96P16 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RPRD1AQ96P16 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC15.3■□□□□ 0.04
RPRD1AQ96P16 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RPRD1AQ96P16 MRPL37P1-201ENST00000592451 1337 ntBASIC15.3■□□□□ 0.04
RPRD1AQ96P16 KLK3-211ENST00000597483 810 ntTSL 2 BASIC15.3■□□□□ 0.04
RPRD1AQ96P16 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
RPRD1AQ96P16 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
RPRD1AQ96P16 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
RPRD1AQ96P16 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
RPRD1AQ96P16 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
RPRD1AQ96P16 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
RPRD1AQ96P16 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
RPRD1AQ96P16 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RPRD1AQ96P16 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RPRD1AQ96P16 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RPRD1AQ96P16 MTHFR-210ENST00000641407 2387 ntBASIC15.29■□□□□ 0.04
RPRD1AQ96P16 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
RPRD1AQ96P16 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.29■□□□□ 0.04
RPRD1AQ96P16 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RPRD1AQ96P16 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RPRD1AQ96P16 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RPRD1AQ96P16 SHC1P1-201ENST00000425230 1745 ntBASIC15.29■□□□□ 0.04
RPRD1AQ96P16 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RPRD1AQ96P16 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
RPRD1AQ96P16 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
RPRD1AQ96P16 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RPRD1AQ96P16 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RPRD1AQ96P16 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
RPRD1AQ96P16 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC15.29■□□□□ 0.04
RPRD1AQ96P16 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC15.29■□□□□ 0.04
RPRD1AQ96P16 PFN1P12-201ENST00000455938 534 ntBASIC15.29■□□□□ 0.04
RPRD1AQ96P16 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC15.29■□□□□ 0.04
RPRD1AQ96P16 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RPRD1AQ96P16 BX088702.1-201ENST00000610784 235 ntBASIC15.29■□□□□ 0.04
RPRD1AQ96P16 AL096828.3-201ENST00000615354 462 ntBASIC15.29■□□□□ 0.04
RPRD1AQ96P16 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC15.29■□□□□ 0.04
RPRD1AQ96P16 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RPRD1AQ96P16 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RPRD1AQ96P16 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RPRD1AQ96P16 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
RPRD1AQ96P16 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.29■□□□□ 0.04
RPRD1AQ96P16 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.29■□□□□ 0.04
RPRD1AQ96P16 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RPRD1AQ96P16 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.29■□□□□ 0.04
RPRD1AQ96P16 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RPRD1AQ96P16 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RPRD1AQ96P16 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RPRD1AQ96P16 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RPRD1AQ96P16 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.29■□□□□ 0.04
RPRD1AQ96P16 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RPRD1AQ96P16 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RPRD1AQ96P16 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC15.29■□□□□ 0.04
RPRD1AQ96P16 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RPRD1AQ96P16 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.29■□□□□ 0.04
RPRD1AQ96P16 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RPRD1AQ96P16 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPRD1AQ96P16 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RPRD1AQ96P16 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC15.28■□□□□ 0.04
RPRD1AQ96P16 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPRD1AQ96P16 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.28■□□□□ 0.04
RPRD1AQ96P16 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPRD1AQ96P16 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPRD1AQ96P16 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
RPRD1AQ96P16 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPRD1AQ96P16 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPRD1AQ96P16 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPRD1AQ96P16 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPRD1AQ96P16 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
RPRD1AQ96P16 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPRD1AQ96P16 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPRD1AQ96P16 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RPRD1AQ96P16 PUDPP3-201ENST00000445368 636 ntBASIC15.28■□□□□ 0.04
RPRD1AQ96P16 HSPB1P2-201ENST00000448722 546 ntBASIC15.28■□□□□ 0.04
RPRD1AQ96P16 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.28■□□□□ 0.04
RPRD1AQ96P16 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RPRD1AQ96P16 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RPRD1AQ96P16 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC15.28■□□□□ 0.04
RPRD1AQ96P16 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.28■□□□□ 0.04
RPRD1AQ96P16 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.28■□□□□ 0.04
RPRD1AQ96P16 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.28■□□□□ 0.04
RPRD1AQ96P16 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC15.28■□□□□ 0.04
RPRD1AQ96P16 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.28■□□□□ 0.04
RPRD1AQ96P16 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.28■□□□□ 0.04
RPRD1AQ96P16 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC15.28■□□□□ 0.04
RPRD1AQ96P16 ABBA01031663.1-201ENST00000635630 790 ntBASIC15.28■□□□□ 0.04
RPRD1AQ96P16 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RPRD1AQ96P16 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.28■□□□□ 0.04
RPRD1AQ96P16 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RPRD1AQ96P16 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPRD1AQ96P16 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RPRD1AQ96P16 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPRD1AQ96P16 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPRD1AQ96P16 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPRD1AQ96P16 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
RPRD1AQ96P16 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.28■□□□□ 0.04
RPRD1AQ96P16 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms