Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LSMEM1Q8N8F7 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LSMEM1Q8N8F7 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.66□□□□□ -0.22
LSMEM1Q8N8F7 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LSMEM1Q8N8F7 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.66□□□□□ -0.22
LSMEM1Q8N8F7 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.66□□□□□ -0.22
LSMEM1Q8N8F7 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LSMEM1Q8N8F7 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LSMEM1Q8N8F7 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.66□□□□□ -0.22
LSMEM1Q8N8F7 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LSMEM1Q8N8F7 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
LSMEM1Q8N8F7 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LSMEM1Q8N8F7 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LSMEM1Q8N8F7 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC13.66□□□□□ -0.22
LSMEM1Q8N8F7 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
LSMEM1Q8N8F7 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC13.66□□□□□ -0.22
LSMEM1Q8N8F7 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LSMEM1Q8N8F7 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LSMEM1Q8N8F7 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.66□□□□□ -0.22
LSMEM1Q8N8F7 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LSMEM1Q8N8F7 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.66□□□□□ -0.22
LSMEM1Q8N8F7 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.66□□□□□ -0.22
LSMEM1Q8N8F7 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
LSMEM1Q8N8F7 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.66□□□□□ -0.22
LSMEM1Q8N8F7 AC190387.1-201ENST00000551683 408 ntBASIC13.66□□□□□ -0.22
LSMEM1Q8N8F7 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
LSMEM1Q8N8F7 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LSMEM1Q8N8F7 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LSMEM1Q8N8F7 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.66□□□□□ -0.22
LSMEM1Q8N8F7 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LSMEM1Q8N8F7 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.66□□□□□ -0.22
LSMEM1Q8N8F7 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
LSMEM1Q8N8F7 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LSMEM1Q8N8F7 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LSMEM1Q8N8F7 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LSMEM1Q8N8F7 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
LSMEM1Q8N8F7 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
LSMEM1Q8N8F7 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LSMEM1Q8N8F7 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LSMEM1Q8N8F7 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LSMEM1Q8N8F7 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LSMEM1Q8N8F7 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
LSMEM1Q8N8F7 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
LSMEM1Q8N8F7 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LSMEM1Q8N8F7 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LSMEM1Q8N8F7 AL138725.1-201ENST00000407347 1314 ntBASIC13.65□□□□□ -0.22
LSMEM1Q8N8F7 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LSMEM1Q8N8F7 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
LSMEM1Q8N8F7 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.65□□□□□ -0.22
LSMEM1Q8N8F7 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LSMEM1Q8N8F7 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LSMEM1Q8N8F7 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LSMEM1Q8N8F7 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LSMEM1Q8N8F7 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LSMEM1Q8N8F7 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LSMEM1Q8N8F7 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LSMEM1Q8N8F7 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LSMEM1Q8N8F7 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LSMEM1Q8N8F7 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
LSMEM1Q8N8F7 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.65□□□□□ -0.22
LSMEM1Q8N8F7 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LSMEM1Q8N8F7 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
LSMEM1Q8N8F7 ACTG1P3-201ENST00000431775 1114 ntBASIC13.65□□□□□ -0.22
LSMEM1Q8N8F7 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LSMEM1Q8N8F7 TERF1P3-201ENST00000505638 1227 ntBASIC13.65□□□□□ -0.22
LSMEM1Q8N8F7 AC131206.1-201ENST00000538078 1211 ntBASIC13.65□□□□□ -0.22
LSMEM1Q8N8F7 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.65□□□□□ -0.22
LSMEM1Q8N8F7 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC13.65□□□□□ -0.22
LSMEM1Q8N8F7 MIR4745-201ENST00000577608 62 ntBASIC13.65□□□□□ -0.22
LSMEM1Q8N8F7 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LSMEM1Q8N8F7 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.65□□□□□ -0.22
LSMEM1Q8N8F7 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
LSMEM1Q8N8F7 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LSMEM1Q8N8F7 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LSMEM1Q8N8F7 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LSMEM1Q8N8F7 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LSMEM1Q8N8F7 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
LSMEM1Q8N8F7 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.65□□□□□ -0.22
LSMEM1Q8N8F7 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LSMEM1Q8N8F7 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.64□□□□□ -0.23
LSMEM1Q8N8F7 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LSMEM1Q8N8F7 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.64□□□□□ -0.23
LSMEM1Q8N8F7 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.64□□□□□ -0.23
LSMEM1Q8N8F7 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
LSMEM1Q8N8F7 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LSMEM1Q8N8F7 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
LSMEM1Q8N8F7 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LSMEM1Q8N8F7 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
LSMEM1Q8N8F7 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LSMEM1Q8N8F7 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
LSMEM1Q8N8F7 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LSMEM1Q8N8F7 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.64□□□□□ -0.23
LSMEM1Q8N8F7 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.64□□□□□ -0.23
LSMEM1Q8N8F7 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.64□□□□□ -0.23
LSMEM1Q8N8F7 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.64□□□□□ -0.23
LSMEM1Q8N8F7 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC13.64□□□□□ -0.23
LSMEM1Q8N8F7 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LSMEM1Q8N8F7 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
LSMEM1Q8N8F7 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LSMEM1Q8N8F7 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms