Protein–RNA interactions for Protein: Q8N7R0

NANOGP1, Putative homeobox protein NANOG2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGP1Q8N7R0 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 SLC25A1P1-201ENST00000528351 927 ntBASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 DUX4L47-201ENST00000566374 394 ntBASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 OS9-218ENST00000551035 2246 ntTSL 2 BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NANOGP1Q8N7R0 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
NANOGP1Q8N7R0 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC13.24□□□□□ -0.29
NANOGP1Q8N7R0 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.24□□□□□ -0.29
NANOGP1Q8N7R0 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NANOGP1Q8N7R0 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NANOGP1Q8N7R0 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
NANOGP1Q8N7R0 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NANOGP1Q8N7R0 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC13.24□□□□□ -0.29
NANOGP1Q8N7R0 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NANOGP1Q8N7R0 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC13.24□□□□□ -0.29
NANOGP1Q8N7R0 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.24□□□□□ -0.29
NANOGP1Q8N7R0 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC13.24□□□□□ -0.29
NANOGP1Q8N7R0 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NANOGP1Q8N7R0 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NANOGP1Q8N7R0 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NANOGP1Q8N7R0 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NANOGP1Q8N7R0 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NANOGP1Q8N7R0 AL136172.1-201ENST00000598590 1394 ntBASIC13.24□□□□□ -0.29
NANOGP1Q8N7R0 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NANOGP1Q8N7R0 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NANOGP1Q8N7R0 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
NANOGP1Q8N7R0 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.24□□□□□ -0.29
NANOGP1Q8N7R0 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
NANOGP1Q8N7R0 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NANOGP1Q8N7R0 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC13.24□□□□□ -0.29
NANOGP1Q8N7R0 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
NANOGP1Q8N7R0 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NANOGP1Q8N7R0 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NANOGP1Q8N7R0 ELL2P1-201ENST00000413990 1906 ntBASIC13.24□□□□□ -0.29
NANOGP1Q8N7R0 CD82-202ENST00000342935 967 ntTSL 5 BASIC13.24□□□□□ -0.29
NANOGP1Q8N7R0 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NANOGP1Q8N7R0 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NANOGP1Q8N7R0 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC13.24□□□□□ -0.29
NANOGP1Q8N7R0 AL590627.1-203ENST00000421194 1026 ntBASIC13.24□□□□□ -0.29
NANOGP1Q8N7R0 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC13.24□□□□□ -0.29
NANOGP1Q8N7R0 NMU-202ENST00000505262 693 ntTSL 3 BASIC13.24□□□□□ -0.29
NANOGP1Q8N7R0 SDHAP3-202ENST00000515467 728 ntBASIC13.24□□□□□ -0.29
NANOGP1Q8N7R0 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NANOGP1Q8N7R0 PUS1-205ENST00000535067 838 ntTSL 3 BASIC13.24□□□□□ -0.29
NANOGP1Q8N7R0 AC010336.2-201ENST00000564226 506 ntBASIC13.24□□□□□ -0.29
NANOGP1Q8N7R0 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.24□□□□□ -0.29
NANOGP1Q8N7R0 MIR6080-201ENST00000617359 66 ntBASIC13.24□□□□□ -0.29
NANOGP1Q8N7R0 AL513210.1-201ENST00000629608 234 ntBASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms