Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC19.85■□□□□ 0.77
XRN1Q8IZH2 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
XRN1Q8IZH2 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC19.85■□□□□ 0.77
XRN1Q8IZH2 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC19.85■□□□□ 0.77
XRN1Q8IZH2 RN7SL375P-201ENST00000492442 298 ntBASIC19.85■□□□□ 0.77
XRN1Q8IZH2 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
XRN1Q8IZH2 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC19.85■□□□□ 0.77
XRN1Q8IZH2 CES1P2-201ENST00000566467 1242 ntBASIC19.85■□□□□ 0.77
XRN1Q8IZH2 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
XRN1Q8IZH2 GGNBP1-204ENST00000613113 887 ntBASIC19.85■□□□□ 0.77
XRN1Q8IZH2 ESR1-214ENST00000638569 132 ntTSL 5 BASIC19.85■□□□□ 0.77
XRN1Q8IZH2 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
XRN1Q8IZH2 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
XRN1Q8IZH2 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
XRN1Q8IZH2 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC19.85■□□□□ 0.77
XRN1Q8IZH2 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
XRN1Q8IZH2 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC19.85■□□□□ 0.77
XRN1Q8IZH2 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
XRN1Q8IZH2 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
XRN1Q8IZH2 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
XRN1Q8IZH2 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC19.85■□□□□ 0.77
XRN1Q8IZH2 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC19.85■□□□□ 0.77
XRN1Q8IZH2 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
XRN1Q8IZH2 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC19.85■□□□□ 0.77
XRN1Q8IZH2 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC19.85■□□□□ 0.77
XRN1Q8IZH2 NRADDP-201ENST00000437305 691 ntBASIC19.85■□□□□ 0.77
XRN1Q8IZH2 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
XRN1Q8IZH2 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
XRN1Q8IZH2 CASP3-205ENST00000517513 964 ntTSL 5 BASIC19.85■□□□□ 0.77
XRN1Q8IZH2 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC19.85■□□□□ 0.77
XRN1Q8IZH2 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC19.85■□□□□ 0.77
XRN1Q8IZH2 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC19.85■□□□□ 0.77
XRN1Q8IZH2 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
XRN1Q8IZH2 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
XRN1Q8IZH2 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
XRN1Q8IZH2 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
XRN1Q8IZH2 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
XRN1Q8IZH2 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
XRN1Q8IZH2 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
XRN1Q8IZH2 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
XRN1Q8IZH2 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
XRN1Q8IZH2 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
XRN1Q8IZH2 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
XRN1Q8IZH2 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
XRN1Q8IZH2 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC19.84■□□□□ 0.77
XRN1Q8IZH2 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
XRN1Q8IZH2 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
XRN1Q8IZH2 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC19.84■□□□□ 0.77
XRN1Q8IZH2 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
XRN1Q8IZH2 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
XRN1Q8IZH2 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
XRN1Q8IZH2 PGAM1P11-201ENST00000416729 680 ntBASIC19.84■□□□□ 0.77
XRN1Q8IZH2 AC093300.1-201ENST00000510368 1201 ntBASIC19.84■□□□□ 0.77
XRN1Q8IZH2 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC19.84■□□□□ 0.77
XRN1Q8IZH2 AL031673.1-201ENST00000611460 466 ntBASIC19.84■□□□□ 0.77
XRN1Q8IZH2 AC011462.4-201ENST00000616866 449 ntBASIC19.84■□□□□ 0.77
XRN1Q8IZH2 AC126755.5-201ENST00000622756 267 ntBASIC19.84■□□□□ 0.77
XRN1Q8IZH2 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC19.84■□□□□ 0.77
XRN1Q8IZH2 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
XRN1Q8IZH2 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
XRN1Q8IZH2 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC19.84■□□□□ 0.77
XRN1Q8IZH2 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
XRN1Q8IZH2 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
XRN1Q8IZH2 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
XRN1Q8IZH2 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC19.84■□□□□ 0.77
XRN1Q8IZH2 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
XRN1Q8IZH2 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
XRN1Q8IZH2 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC19.84■□□□□ 0.77
XRN1Q8IZH2 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
XRN1Q8IZH2 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
XRN1Q8IZH2 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
XRN1Q8IZH2 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
XRN1Q8IZH2 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC19.83■□□□□ 0.77
XRN1Q8IZH2 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC19.83■□□□□ 0.77
XRN1Q8IZH2 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
XRN1Q8IZH2 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
XRN1Q8IZH2 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
XRN1Q8IZH2 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
XRN1Q8IZH2 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
XRN1Q8IZH2 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
XRN1Q8IZH2 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
XRN1Q8IZH2 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
XRN1Q8IZH2 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
XRN1Q8IZH2 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC19.83■□□□□ 0.77
XRN1Q8IZH2 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
XRN1Q8IZH2 AC092903.1-201ENST00000466506 262 ntBASIC19.83■□□□□ 0.77
XRN1Q8IZH2 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC19.83■□□□□ 0.77
XRN1Q8IZH2 BCRP4-201ENST00000506079 804 ntBASIC19.83■□□□□ 0.77
XRN1Q8IZH2 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC19.83■□□□□ 0.77
XRN1Q8IZH2 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC19.83■□□□□ 0.77
XRN1Q8IZH2 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC19.83■□□□□ 0.77
XRN1Q8IZH2 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC19.83■□□□□ 0.77
XRN1Q8IZH2 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC19.83■□□□□ 0.77
XRN1Q8IZH2 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC19.83■□□□□ 0.77
XRN1Q8IZH2 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
XRN1Q8IZH2 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
XRN1Q8IZH2 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC19.83■□□□□ 0.76
XRN1Q8IZH2 AL162727.3-201ENST00000635661 2787 ntBASIC19.83■□□□□ 0.76
XRN1Q8IZH2 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
XRN1Q8IZH2 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms