Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.76□□□□□ -0.21
VRK2Q86Y07 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VRK2Q86Y07 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VRK2Q86Y07 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VRK2Q86Y07 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
VRK2Q86Y07 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VRK2Q86Y07 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
VRK2Q86Y07 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.76□□□□□ -0.21
VRK2Q86Y07 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
VRK2Q86Y07 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VRK2Q86Y07 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.76□□□□□ -0.21
VRK2Q86Y07 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VRK2Q86Y07 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
VRK2Q86Y07 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VRK2Q86Y07 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VRK2Q86Y07 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VRK2Q86Y07 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
VRK2Q86Y07 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
VRK2Q86Y07 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
VRK2Q86Y07 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
VRK2Q86Y07 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.75□□□□□ -0.21
VRK2Q86Y07 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VRK2Q86Y07 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
VRK2Q86Y07 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
VRK2Q86Y07 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
VRK2Q86Y07 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VRK2Q86Y07 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.75□□□□□ -0.21
VRK2Q86Y07 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.75□□□□□ -0.21
VRK2Q86Y07 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
VRK2Q86Y07 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VRK2Q86Y07 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.75□□□□□ -0.21
VRK2Q86Y07 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.75□□□□□ -0.21
VRK2Q86Y07 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.75□□□□□ -0.21
VRK2Q86Y07 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VRK2Q86Y07 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VRK2Q86Y07 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
VRK2Q86Y07 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.75□□□□□ -0.21
VRK2Q86Y07 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
VRK2Q86Y07 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.75□□□□□ -0.21
VRK2Q86Y07 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
VRK2Q86Y07 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
VRK2Q86Y07 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
VRK2Q86Y07 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.75□□□□□ -0.21
VRK2Q86Y07 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
VRK2Q86Y07 RN7SKP230-201ENST00000365642 335 ntBASIC13.75□□□□□ -0.21
VRK2Q86Y07 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VRK2Q86Y07 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
VRK2Q86Y07 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
VRK2Q86Y07 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.75□□□□□ -0.21
VRK2Q86Y07 TERF1P3-201ENST00000505638 1227 ntBASIC13.75□□□□□ -0.21
VRK2Q86Y07 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.75□□□□□ -0.21
VRK2Q86Y07 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
VRK2Q86Y07 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
VRK2Q86Y07 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
VRK2Q86Y07 AC145423.3-201ENST00000615987 467 ntBASIC13.75□□□□□ -0.21
VRK2Q86Y07 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VRK2Q86Y07 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VRK2Q86Y07 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
VRK2Q86Y07 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
VRK2Q86Y07 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VRK2Q86Y07 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
VRK2Q86Y07 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VRK2Q86Y07 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
VRK2Q86Y07 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VRK2Q86Y07 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
VRK2Q86Y07 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
VRK2Q86Y07 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
VRK2Q86Y07 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.75□□□□□ -0.21
VRK2Q86Y07 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
VRK2Q86Y07 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VRK2Q86Y07 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VRK2Q86Y07 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VRK2Q86Y07 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VRK2Q86Y07 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
VRK2Q86Y07 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
VRK2Q86Y07 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
VRK2Q86Y07 AC020910.5-201ENST00000623668 1865 ntBASIC13.74□□□□□ -0.21
VRK2Q86Y07 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.74□□□□□ -0.21
VRK2Q86Y07 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
VRK2Q86Y07 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
VRK2Q86Y07 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.74□□□□□ -0.21
VRK2Q86Y07 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
VRK2Q86Y07 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VRK2Q86Y07 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VRK2Q86Y07 CLUHP2-201ENST00000426660 1303 ntBASIC13.74□□□□□ -0.21
VRK2Q86Y07 MRPL37P1-201ENST00000592451 1337 ntBASIC13.74□□□□□ -0.21
VRK2Q86Y07 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VRK2Q86Y07 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VRK2Q86Y07 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
VRK2Q86Y07 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.74□□□□□ -0.21
VRK2Q86Y07 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
VRK2Q86Y07 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VRK2Q86Y07 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VRK2Q86Y07 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.74□□□□□ -0.21
VRK2Q86Y07 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.74□□□□□ -0.21
VRK2Q86Y07 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
VRK2Q86Y07 AC131206.1-201ENST00000538078 1211 ntBASIC13.74□□□□□ -0.21
VRK2Q86Y07 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC13.74□□□□□ -0.21
VRK2Q86Y07 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.74□□□□□ -0.21
VRK2Q86Y07 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms