Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC25Q86WR0 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.41■□□□□ 0.06
CCDC25Q86WR0 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC25Q86WR0 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC25Q86WR0 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.41■□□□□ 0.06
CCDC25Q86WR0 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC25Q86WR0 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC25Q86WR0 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC25Q86WR0 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC15.41■□□□□ 0.06
CCDC25Q86WR0 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC25Q86WR0 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.41■□□□□ 0.06
CCDC25Q86WR0 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC25Q86WR0 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC25Q86WR0 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC25Q86WR0 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
CCDC25Q86WR0 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.41■□□□□ 0.06
CCDC25Q86WR0 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.41■□□□□ 0.06
CCDC25Q86WR0 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.41■□□□□ 0.06
CCDC25Q86WR0 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.41■□□□□ 0.06
CCDC25Q86WR0 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC25Q86WR0 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.41■□□□□ 0.06
CCDC25Q86WR0 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CCDC25Q86WR0 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.41■□□□□ 0.06
CCDC25Q86WR0 TIMM17BP1-201ENST00000545713 516 ntBASIC15.41■□□□□ 0.06
CCDC25Q86WR0 AC044860.1-202ENST00000559481 777 ntBASIC15.41■□□□□ 0.06
CCDC25Q86WR0 MIR3687-2-201ENST00000577708 61 ntBASIC15.41■□□□□ 0.06
CCDC25Q86WR0 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC25Q86WR0 MIR3687-1-201ENST00000614492 61 ntBASIC15.41■□□□□ 0.06
CCDC25Q86WR0 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC25Q86WR0 AL158070.2-201ENST00000623713 1621 ntBASIC15.41■□□□□ 0.06
CCDC25Q86WR0 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC25Q86WR0 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC15.41■□□□□ 0.06
CCDC25Q86WR0 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
CCDC25Q86WR0 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC15.41■□□□□ 0.06
CCDC25Q86WR0 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC25Q86WR0 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
CCDC25Q86WR0 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC25Q86WR0 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC25Q86WR0 KRT8P22-201ENST00000562317 1415 ntBASIC15.41■□□□□ 0.06
CCDC25Q86WR0 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC25Q86WR0 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CCDC25Q86WR0 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC25Q86WR0 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC25Q86WR0 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CCDC25Q86WR0 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CCDC25Q86WR0 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CCDC25Q86WR0 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC25Q86WR0 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC25Q86WR0 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC25Q86WR0 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC25Q86WR0 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC25Q86WR0 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC25Q86WR0 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC25Q86WR0 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC25Q86WR0 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC25Q86WR0 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC25Q86WR0 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC25Q86WR0 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC15.4■□□□□ 0.06
CCDC25Q86WR0 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC15.4■□□□□ 0.06
CCDC25Q86WR0 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
CCDC25Q86WR0 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC15.4■□□□□ 0.06
CCDC25Q86WR0 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC25Q86WR0 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.4■□□□□ 0.06
CCDC25Q86WR0 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC15.4■□□□□ 0.06
CCDC25Q86WR0 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC25Q86WR0 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC25Q86WR0 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC25Q86WR0 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC25Q86WR0 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
CCDC25Q86WR0 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.4■□□□□ 0.06
CCDC25Q86WR0 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.4■□□□□ 0.06
CCDC25Q86WR0 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.4■□□□□ 0.06
CCDC25Q86WR0 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.4■□□□□ 0.06
CCDC25Q86WR0 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.4■□□□□ 0.06
CCDC25Q86WR0 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.4■□□□□ 0.06
CCDC25Q86WR0 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.4■□□□□ 0.06
CCDC25Q86WR0 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.4■□□□□ 0.06
CCDC25Q86WR0 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.4■□□□□ 0.06
CCDC25Q86WR0 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
CCDC25Q86WR0 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.4■□□□□ 0.06
CCDC25Q86WR0 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC25Q86WR0 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC25Q86WR0 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC15.4■□□□□ 0.06
CCDC25Q86WR0 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC25Q86WR0 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC25Q86WR0 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.4■□□□□ 0.06
CCDC25Q86WR0 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC25Q86WR0 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.4■□□□□ 0.06
CCDC25Q86WR0 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC15.4■□□□□ 0.06
CCDC25Q86WR0 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC15.4■□□□□ 0.06
CCDC25Q86WR0 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC15.4■□□□□ 0.06
CCDC25Q86WR0 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC25Q86WR0 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC25Q86WR0 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC25Q86WR0 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC15.4■□□□□ 0.06
CCDC25Q86WR0 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CCDC25Q86WR0 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC25Q86WR0 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CCDC25Q86WR0 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CCDC25Q86WR0 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms