Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
CDC42BPAQ5VT25 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC21.7■■□□□ 1.06
CDC42BPAQ5VT25 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC21.7■■□□□ 1.06
CDC42BPAQ5VT25 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDC42BPAQ5VT25 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDC42BPAQ5VT25 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
CDC42BPAQ5VT25 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDC42BPAQ5VT25 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDC42BPAQ5VT25 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CDC42BPAQ5VT25 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDC42BPAQ5VT25 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDC42BPAQ5VT25 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CDC42BPAQ5VT25 GPI-205ENST00000586425 1799 ntTSL 5 BASIC21.69■■□□□ 1.06
CDC42BPAQ5VT25 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
CDC42BPAQ5VT25 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
CDC42BPAQ5VT25 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC21.69■■□□□ 1.06
CDC42BPAQ5VT25 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDC42BPAQ5VT25 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC21.69■■□□□ 1.06
CDC42BPAQ5VT25 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC21.69■■□□□ 1.06
CDC42BPAQ5VT25 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC21.69■■□□□ 1.06
CDC42BPAQ5VT25 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDC42BPAQ5VT25 AL109809.1-201ENST00000418979 1367 ntBASIC21.69■■□□□ 1.06
CDC42BPAQ5VT25 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDC42BPAQ5VT25 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDC42BPAQ5VT25 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC21.69■■□□□ 1.06
CDC42BPAQ5VT25 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC21.69■■□□□ 1.06
CDC42BPAQ5VT25 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC21.69■■□□□ 1.06
CDC42BPAQ5VT25 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CDC42BPAQ5VT25 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CDC42BPAQ5VT25 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
CDC42BPAQ5VT25 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDC42BPAQ5VT25 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC21.69■■□□□ 1.06
CDC42BPAQ5VT25 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
CDC42BPAQ5VT25 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CDC42BPAQ5VT25 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC21.69■■□□□ 1.06
CDC42BPAQ5VT25 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CDC42BPAQ5VT25 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CDC42BPAQ5VT25 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
CDC42BPAQ5VT25 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC21.69■■□□□ 1.06
CDC42BPAQ5VT25 AC073210.1-201ENST00000414799 232 ntBASIC21.69■■□□□ 1.06
CDC42BPAQ5VT25 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CDC42BPAQ5VT25 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC21.69■■□□□ 1.06
CDC42BPAQ5VT25 AC010632.2-201ENST00000588369 1224 ntBASIC21.69■■□□□ 1.06
CDC42BPAQ5VT25 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDC42BPAQ5VT25 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC21.69■■□□□ 1.06
CDC42BPAQ5VT25 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC21.69■■□□□ 1.06
CDC42BPAQ5VT25 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC21.68■■□□□ 1.06
CDC42BPAQ5VT25 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDC42BPAQ5VT25 AC073347.1-201ENST00000421633 2643 ntBASIC21.68■■□□□ 1.06
CDC42BPAQ5VT25 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDC42BPAQ5VT25 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CDC42BPAQ5VT25 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDC42BPAQ5VT25 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDC42BPAQ5VT25 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
CDC42BPAQ5VT25 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CDC42BPAQ5VT25 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDC42BPAQ5VT25 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CDC42BPAQ5VT25 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDC42BPAQ5VT25 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDC42BPAQ5VT25 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDC42BPAQ5VT25 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CDC42BPAQ5VT25 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC21.68■■□□□ 1.06
CDC42BPAQ5VT25 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDC42BPAQ5VT25 PEBP1P2-201ENST00000603980 558 ntBASIC21.68■■□□□ 1.06
CDC42BPAQ5VT25 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC21.68■■□□□ 1.06
CDC42BPAQ5VT25 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDC42BPAQ5VT25 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC21.68■■□□□ 1.06
CDC42BPAQ5VT25 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC21.68■■□□□ 1.06
CDC42BPAQ5VT25 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDC42BPAQ5VT25 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC21.68■■□□□ 1.06
CDC42BPAQ5VT25 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDC42BPAQ5VT25 LINC00554-201ENST00000564841 3011 ntBASIC21.68■■□□□ 1.06
CDC42BPAQ5VT25 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDC42BPAQ5VT25 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CDC42BPAQ5VT25 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDC42BPAQ5VT25 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
CDC42BPAQ5VT25 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CDC42BPAQ5VT25 AC105917.1-201ENST00000506637 2539 ntBASIC21.67■■□□□ 1.06
CDC42BPAQ5VT25 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CDC42BPAQ5VT25 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CDC42BPAQ5VT25 AL365181.1-201ENST00000564032 1828 ntBASIC21.67■■□□□ 1.06
CDC42BPAQ5VT25 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDC42BPAQ5VT25 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDC42BPAQ5VT25 PTGER4P2-201ENST00000328411 252 ntBASIC21.67■■□□□ 1.06
CDC42BPAQ5VT25 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC21.67■■□□□ 1.06
CDC42BPAQ5VT25 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC21.67■■□□□ 1.06
CDC42BPAQ5VT25 PTGER4P3-201ENST00000458150 252 ntBASIC21.67■■□□□ 1.06
CDC42BPAQ5VT25 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
CDC42BPAQ5VT25 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CDC42BPAQ5VT25 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC21.67■■□□□ 1.06
CDC42BPAQ5VT25 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC21.67■■□□□ 1.06
CDC42BPAQ5VT25 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDC42BPAQ5VT25 TCAF2P1-201ENST00000291129 2421 ntBASIC21.67■■□□□ 1.06
CDC42BPAQ5VT25 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDC42BPAQ5VT25 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC21.67■■□□□ 1.06
CDC42BPAQ5VT25 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CDC42BPAQ5VT25 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDC42BPAQ5VT25 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC21.67■■□□□ 1.06
CDC42BPAQ5VT25 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
CDC42BPAQ5VT25 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms