Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
HMGCS1Q01581 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HMGCS1Q01581 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.35□□□□□ -0.11
HMGCS1Q01581 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.35□□□□□ -0.11
HMGCS1Q01581 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HMGCS1Q01581 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMGCS1Q01581 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMGCS1Q01581 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HMGCS1Q01581 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
HMGCS1Q01581 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
HMGCS1Q01581 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HMGCS1Q01581 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMGCS1Q01581 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
HMGCS1Q01581 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
HMGCS1Q01581 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
HMGCS1Q01581 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMGCS1Q01581 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMGCS1Q01581 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMGCS1Q01581 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMGCS1Q01581 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMGCS1Q01581 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMGCS1Q01581 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HMGCS1Q01581 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.35□□□□□ -0.11
HMGCS1Q01581 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
HMGCS1Q01581 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
HMGCS1Q01581 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
HMGCS1Q01581 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMGCS1Q01581 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.35□□□□□ -0.11
HMGCS1Q01581 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.35□□□□□ -0.11
HMGCS1Q01581 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMGCS1Q01581 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.35□□□□□ -0.11
HMGCS1Q01581 ENPP7P5-201ENST00000541031 1031 ntBASIC14.35□□□□□ -0.11
HMGCS1Q01581 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.35□□□□□ -0.11
HMGCS1Q01581 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HMGCS1Q01581 AP001063.1-201ENST00000568332 529 ntBASIC14.35□□□□□ -0.11
HMGCS1Q01581 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.35□□□□□ -0.11
HMGCS1Q01581 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
HMGCS1Q01581 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.35□□□□□ -0.11
HMGCS1Q01581 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.35□□□□□ -0.11
HMGCS1Q01581 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.35□□□□□ -0.11
HMGCS1Q01581 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.35□□□□□ -0.11
HMGCS1Q01581 AL603764.1-201ENST00000636452 321 ntBASIC14.35□□□□□ -0.11
HMGCS1Q01581 AC092135.3-201ENST00000624151 1846 ntBASIC14.35□□□□□ -0.11
HMGCS1Q01581 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMGCS1Q01581 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMGCS1Q01581 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
HMGCS1Q01581 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
HMGCS1Q01581 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMGCS1Q01581 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.35□□□□□ -0.11
HMGCS1Q01581 KRT8P35-201ENST00000483942 1338 ntBASIC14.35□□□□□ -0.11
HMGCS1Q01581 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HMGCS1Q01581 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
HMGCS1Q01581 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMGCS1Q01581 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HMGCS1Q01581 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMGCS1Q01581 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HMGCS1Q01581 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HMGCS1Q01581 AL136172.1-201ENST00000598590 1394 ntBASIC14.34□□□□□ -0.11
HMGCS1Q01581 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
HMGCS1Q01581 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.34□□□□□ -0.11
HMGCS1Q01581 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HMGCS1Q01581 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
HMGCS1Q01581 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HMGCS1Q01581 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HMGCS1Q01581 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
HMGCS1Q01581 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
HMGCS1Q01581 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.34□□□□□ -0.11
HMGCS1Q01581 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.34□□□□□ -0.11
HMGCS1Q01581 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HMGCS1Q01581 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HMGCS1Q01581 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.34□□□□□ -0.11
HMGCS1Q01581 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HMGCS1Q01581 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HMGCS1Q01581 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HMGCS1Q01581 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.34□□□□□ -0.11
HMGCS1Q01581 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
HMGCS1Q01581 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HMGCS1Q01581 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HMGCS1Q01581 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
HMGCS1Q01581 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.34□□□□□ -0.11
HMGCS1Q01581 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.34□□□□□ -0.11
HMGCS1Q01581 AC093433.1-201ENST00000458048 571 ntBASIC14.34□□□□□ -0.11
HMGCS1Q01581 KRT18P25-201ENST00000508931 1278 ntBASIC14.34□□□□□ -0.11
HMGCS1Q01581 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
HMGCS1Q01581 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
HMGCS1Q01581 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HMGCS1Q01581 MSTO2P-201ENST00000314835 1709 ntBASIC14.34□□□□□ -0.11
HMGCS1Q01581 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HMGCS1Q01581 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
HMGCS1Q01581 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
HMGCS1Q01581 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
HMGCS1Q01581 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.34□□□□□ -0.11
HMGCS1Q01581 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.34□□□□□ -0.11
HMGCS1Q01581 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HMGCS1Q01581 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
HMGCS1Q01581 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HMGCS1Q01581 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
HMGCS1Q01581 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
HMGCS1Q01581 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HMGCS1Q01581 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms