Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
SEC61A1P61619 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SEC61A1P61619 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SEC61A1P61619 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SEC61A1P61619 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SEC61A1P61619 WASH3P-207ENST00000560956 1394 ntBASIC13.11□□□□□ -0.31
SEC61A1P61619 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
SEC61A1P61619 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.11□□□□□ -0.31
SEC61A1P61619 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13.11□□□□□ -0.31
SEC61A1P61619 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.11□□□□□ -0.31
SEC61A1P61619 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SEC61A1P61619 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SEC61A1P61619 AC136604.1-201ENST00000418535 575 ntBASIC13.11□□□□□ -0.31
SEC61A1P61619 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.11□□□□□ -0.31
SEC61A1P61619 MEP1AP4-201ENST00000423244 1087 ntBASIC13.11□□□□□ -0.31
SEC61A1P61619 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC13.11□□□□□ -0.31
SEC61A1P61619 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.11□□□□□ -0.31
SEC61A1P61619 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SEC61A1P61619 RARRES2P5-201ENST00000564013 466 ntBASIC13.11□□□□□ -0.31
SEC61A1P61619 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.11□□□□□ -0.31
SEC61A1P61619 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC13.11□□□□□ -0.31
SEC61A1P61619 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.11□□□□□ -0.31
SEC61A1P61619 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SEC61A1P61619 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SEC61A1P61619 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SEC61A1P61619 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
SEC61A1P61619 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.11□□□□□ -0.31
SEC61A1P61619 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
SEC61A1P61619 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SEC61A1P61619 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC13.11□□□□□ -0.31
SEC61A1P61619 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SEC61A1P61619 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SEC61A1P61619 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
SEC61A1P61619 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.11□□□□□ -0.31
SEC61A1P61619 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
SEC61A1P61619 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
SEC61A1P61619 CLK3P2-201ENST00000427566 1453 ntBASIC13.1□□□□□ -0.31
SEC61A1P61619 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SEC61A1P61619 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
SEC61A1P61619 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
SEC61A1P61619 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SEC61A1P61619 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SEC61A1P61619 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
SEC61A1P61619 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SEC61A1P61619 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SEC61A1P61619 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SEC61A1P61619 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.1□□□□□ -0.31
SEC61A1P61619 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.1□□□□□ -0.31
SEC61A1P61619 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SEC61A1P61619 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
SEC61A1P61619 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SEC61A1P61619 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SEC61A1P61619 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
SEC61A1P61619 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SEC61A1P61619 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SEC61A1P61619 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
SEC61A1P61619 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.1□□□□□ -0.31
SEC61A1P61619 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SEC61A1P61619 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
SEC61A1P61619 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SEC61A1P61619 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.1□□□□□ -0.31
SEC61A1P61619 AP006294.1-201ENST00000415407 339 ntBASIC13.1□□□□□ -0.31
SEC61A1P61619 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.1□□□□□ -0.31
SEC61A1P61619 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.1□□□□□ -0.31
SEC61A1P61619 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.1□□□□□ -0.31
SEC61A1P61619 INE1-201ENST00000456273 945 ntBASIC13.1□□□□□ -0.31
SEC61A1P61619 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.1□□□□□ -0.31
SEC61A1P61619 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
SEC61A1P61619 SLED1-202ENST00000512051 380 ntBASIC13.1□□□□□ -0.31
SEC61A1P61619 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.1□□□□□ -0.31
SEC61A1P61619 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
SEC61A1P61619 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.1□□□□□ -0.31
SEC61A1P61619 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.1□□□□□ -0.31
SEC61A1P61619 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SEC61A1P61619 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC13.1□□□□□ -0.31
SEC61A1P61619 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.1□□□□□ -0.31
SEC61A1P61619 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.1□□□□□ -0.31
SEC61A1P61619 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.1□□□□□ -0.31
SEC61A1P61619 AC093726.1-201ENST00000608064 963 ntBASIC13.1□□□□□ -0.31
SEC61A1P61619 AC099568.2-201ENST00000609194 695 ntBASIC13.1□□□□□ -0.31
SEC61A1P61619 AL391069.4-201ENST00000609583 481 ntBASIC13.1□□□□□ -0.31
SEC61A1P61619 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SEC61A1P61619 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
SEC61A1P61619 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SEC61A1P61619 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.1□□□□□ -0.31
SEC61A1P61619 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SEC61A1P61619 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
SEC61A1P61619 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SEC61A1P61619 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
SEC61A1P61619 MTHFR-210ENST00000641407 2387 ntBASIC13.1□□□□□ -0.31
SEC61A1P61619 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
SEC61A1P61619 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SEC61A1P61619 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.1□□□□□ -0.31
SEC61A1P61619 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
SEC61A1P61619 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.1□□□□□ -0.31
SEC61A1P61619 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SEC61A1P61619 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
SEC61A1P61619 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
SEC61A1P61619 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.1□□□□□ -0.31
SEC61A1P61619 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms