Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
SSR4P51571 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.58□□□□□ -0.23
SSR4P51571 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
SSR4P51571 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
SSR4P51571 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.58□□□□□ -0.23
SSR4P51571 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SSR4P51571 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
SSR4P51571 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SSR4P51571 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SSR4P51571 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SSR4P51571 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
SSR4P51571 AC067750.1-201ENST00000608826 6545 ntBASIC13.58□□□□□ -0.24
SSR4P51571 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SSR4P51571 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC13.58□□□□□ -0.24
SSR4P51571 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SSR4P51571 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SSR4P51571 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SSR4P51571 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
SSR4P51571 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
SSR4P51571 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC13.58□□□□□ -0.24
SSR4P51571 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
SSR4P51571 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SSR4P51571 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
SSR4P51571 FNTAP2-201ENST00000430308 634 ntBASIC13.58□□□□□ -0.24
SSR4P51571 CALR4P-201ENST00000431943 946 ntBASIC13.58□□□□□ -0.24
SSR4P51571 NKAIN1P1-201ENST00000435754 582 ntBASIC13.58□□□□□ -0.24
SSR4P51571 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SSR4P51571 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SSR4P51571 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13.58□□□□□ -0.24
SSR4P51571 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC13.58□□□□□ -0.24
SSR4P51571 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC13.58□□□□□ -0.24
SSR4P51571 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
SSR4P51571 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC13.58□□□□□ -0.24
SSR4P51571 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC13.58□□□□□ -0.24
SSR4P51571 AC013355.1-201ENST00000562625 723 ntBASIC13.58□□□□□ -0.24
SSR4P51571 AC005324.6-201ENST00000587972 613 ntBASIC13.58□□□□□ -0.24
SSR4P51571 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC13.58□□□□□ -0.24
SSR4P51571 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC13.58□□□□□ -0.24
SSR4P51571 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC13.58□□□□□ -0.24
SSR4P51571 MIR6720-201ENST00000611664 98 ntBASIC13.58□□□□□ -0.24
SSR4P51571 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC13.58□□□□□ -0.24
SSR4P51571 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13.58□□□□□ -0.24
SSR4P51571 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.58□□□□□ -0.24
SSR4P51571 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.58□□□□□ -0.24
SSR4P51571 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.58□□□□□ -0.24
SSR4P51571 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC13.58□□□□□ -0.24
SSR4P51571 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
SSR4P51571 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SSR4P51571 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SSR4P51571 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SSR4P51571 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC13.58□□□□□ -0.24
SSR4P51571 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SSR4P51571 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SSR4P51571 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SSR4P51571 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SSR4P51571 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SSR4P51571 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.58□□□□□ -0.24
SSR4P51571 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SSR4P51571 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC13.58□□□□□ -0.24
SSR4P51571 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SSR4P51571 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SSR4P51571 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SSR4P51571 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SSR4P51571 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SSR4P51571 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SSR4P51571 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SSR4P51571 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SSR4P51571 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SSR4P51571 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.57□□□□□ -0.24
SSR4P51571 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SSR4P51571 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
SSR4P51571 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
SSR4P51571 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
SSR4P51571 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SSR4P51571 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SSR4P51571 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
SSR4P51571 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
SSR4P51571 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
SSR4P51571 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SSR4P51571 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.57□□□□□ -0.24
SSR4P51571 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SSR4P51571 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SSR4P51571 DPM3-202ENST00000368399 517 ntBASIC13.57□□□□□ -0.24
SSR4P51571 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
SSR4P51571 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SSR4P51571 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
SSR4P51571 BCYRN1-201ENST00000418539 200 ntBASIC13.57□□□□□ -0.24
SSR4P51571 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.57□□□□□ -0.24
SSR4P51571 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC13.57□□□□□ -0.24
SSR4P51571 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.57□□□□□ -0.24
SSR4P51571 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SSR4P51571 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC13.57□□□□□ -0.24
SSR4P51571 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
SSR4P51571 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
SSR4P51571 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC13.57□□□□□ -0.24
SSR4P51571 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC13.57□□□□□ -0.24
SSR4P51571 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
SSR4P51571 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
SSR4P51571 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SSR4P51571 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms