Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
POLR3DP05423 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
POLR3DP05423 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.75■□□□□ 0.43
POLR3DP05423 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
POLR3DP05423 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC17.75■□□□□ 0.43
POLR3DP05423 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC17.75■□□□□ 0.43
POLR3DP05423 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
POLR3DP05423 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
POLR3DP05423 USP28-214ENST00000545540 3431 ntTSL 2 BASIC17.75■□□□□ 0.43
POLR3DP05423 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
POLR3DP05423 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
POLR3DP05423 USP35-204ENST00000530267 2419 ntTSL 2 BASIC17.74■□□□□ 0.43
POLR3DP05423 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
POLR3DP05423 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
POLR3DP05423 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
POLR3DP05423 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC17.74■□□□□ 0.43
POLR3DP05423 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
POLR3DP05423 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC17.74■□□□□ 0.43
POLR3DP05423 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
POLR3DP05423 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
POLR3DP05423 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC17.74■□□□□ 0.43
POLR3DP05423 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
POLR3DP05423 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
POLR3DP05423 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
POLR3DP05423 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
POLR3DP05423 AC099063.4-201ENST00000641099 1602 ntBASIC17.74■□□□□ 0.43
POLR3DP05423 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
POLR3DP05423 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC17.74■□□□□ 0.43
POLR3DP05423 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
POLR3DP05423 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
POLR3DP05423 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC17.74■□□□□ 0.43
POLR3DP05423 SMS-201ENST00000379404 1174 ntTSL 3 BASIC17.74■□□□□ 0.43
POLR3DP05423 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
POLR3DP05423 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
POLR3DP05423 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
POLR3DP05423 TLE1P1-201ENST00000422965 589 ntBASIC17.74■□□□□ 0.43
POLR3DP05423 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
POLR3DP05423 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC17.74■□□□□ 0.43
POLR3DP05423 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
POLR3DP05423 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC17.74■□□□□ 0.43
POLR3DP05423 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC17.74■□□□□ 0.43
POLR3DP05423 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC17.74■□□□□ 0.43
POLR3DP05423 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
POLR3DP05423 KC6-205ENST00000599934 556 ntTSL 4 BASIC17.74■□□□□ 0.43
POLR3DP05423 AL451050.2-201ENST00000606967 682 ntBASIC17.74■□□□□ 0.43
POLR3DP05423 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC17.74■□□□□ 0.43
POLR3DP05423 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
POLR3DP05423 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
POLR3DP05423 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
POLR3DP05423 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC17.74■□□□□ 0.43
POLR3DP05423 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
POLR3DP05423 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC17.74■□□□□ 0.43
POLR3DP05423 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
POLR3DP05423 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC17.74■□□□□ 0.43
POLR3DP05423 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
POLR3DP05423 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
POLR3DP05423 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC17.73■□□□□ 0.43
POLR3DP05423 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
POLR3DP05423 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC17.73■□□□□ 0.43
POLR3DP05423 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC17.73■□□□□ 0.43
POLR3DP05423 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
POLR3DP05423 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
POLR3DP05423 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
POLR3DP05423 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
POLR3DP05423 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
POLR3DP05423 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC17.73■□□□□ 0.43
POLR3DP05423 LINC00552-201ENST00000625151 2579 ntBASIC17.73■□□□□ 0.43
POLR3DP05423 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
POLR3DP05423 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
POLR3DP05423 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
POLR3DP05423 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC17.73■□□□□ 0.43
POLR3DP05423 AC091804.1-201ENST00000486888 567 ntBASIC17.73■□□□□ 0.43
POLR3DP05423 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC17.73■□□□□ 0.43
POLR3DP05423 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
POLR3DP05423 AC020914.3-201ENST00000594712 304 ntBASIC17.73■□□□□ 0.43
POLR3DP05423 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC17.73■□□□□ 0.43
POLR3DP05423 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC17.73■□□□□ 0.43
POLR3DP05423 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
POLR3DP05423 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
POLR3DP05423 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
POLR3DP05423 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
POLR3DP05423 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
POLR3DP05423 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
POLR3DP05423 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
POLR3DP05423 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
POLR3DP05423 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
POLR3DP05423 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
POLR3DP05423 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC17.73■□□□□ 0.43
POLR3DP05423 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
POLR3DP05423 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
POLR3DP05423 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
POLR3DP05423 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
POLR3DP05423 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
POLR3DP05423 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
POLR3DP05423 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
POLR3DP05423 SHC1P1-201ENST00000425230 1745 ntBASIC17.72■□□□□ 0.43
POLR3DP05423 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
POLR3DP05423 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
POLR3DP05423 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
POLR3DP05423 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms