Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
MT-ND1P03886 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
MT-ND1P03886 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MT-ND1P03886 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MT-ND1P03886 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
MT-ND1P03886 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
MT-ND1P03886 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
MT-ND1P03886 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
MT-ND1P03886 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
MT-ND1P03886 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
MT-ND1P03886 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MT-ND1P03886 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.09□□□□□ -0.15
MT-ND1P03886 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MT-ND1P03886 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MT-ND1P03886 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MT-ND1P03886 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
MT-ND1P03886 TSEN15P1-201ENST00000423257 515 ntBASIC14.09□□□□□ -0.15
MT-ND1P03886 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.09□□□□□ -0.15
MT-ND1P03886 DNAJB3-202ENST00000449667 1266 ntBASIC14.09□□□□□ -0.15
MT-ND1P03886 RN7SL618P-201ENST00000477850 296 ntBASIC14.09□□□□□ -0.15
MT-ND1P03886 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.09□□□□□ -0.15
MT-ND1P03886 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.09□□□□□ -0.15
MT-ND1P03886 AL512361.1-201ENST00000554200 418 ntBASIC14.09□□□□□ -0.15
MT-ND1P03886 AC074044.1-201ENST00000609673 707 ntBASIC14.09□□□□□ -0.15
MT-ND1P03886 AL138828.2-201ENST00000615812 383 ntBASIC14.09□□□□□ -0.15
MT-ND1P03886 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.09□□□□□ -0.15
MT-ND1P03886 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MT-ND1P03886 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
MT-ND1P03886 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.09□□□□□ -0.15
MT-ND1P03886 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
MT-ND1P03886 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MT-ND1P03886 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
MT-ND1P03886 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
MT-ND1P03886 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MT-ND1P03886 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MT-ND1P03886 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
MT-ND1P03886 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
MT-ND1P03886 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.09□□□□□ -0.15
MT-ND1P03886 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
MT-ND1P03886 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
MT-ND1P03886 TUBB3P1-201ENST00000405796 1332 ntBASIC14.09□□□□□ -0.15
MT-ND1P03886 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MT-ND1P03886 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MT-ND1P03886 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC14.09□□□□□ -0.15
MT-ND1P03886 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MT-ND1P03886 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
MT-ND1P03886 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.09□□□□□ -0.15
MT-ND1P03886 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MT-ND1P03886 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MT-ND1P03886 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
MT-ND1P03886 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
MT-ND1P03886 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC14.08□□□□□ -0.15
MT-ND1P03886 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.15
MT-ND1P03886 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
MT-ND1P03886 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.15
MT-ND1P03886 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MT-ND1P03886 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
MT-ND1P03886 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
MT-ND1P03886 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
MT-ND1P03886 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
MT-ND1P03886 AL365181.3-201ENST00000605886 3222 ntBASIC14.08□□□□□ -0.16
MT-ND1P03886 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC14.08□□□□□ -0.16
MT-ND1P03886 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.08□□□□□ -0.16
MT-ND1P03886 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
MT-ND1P03886 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MT-ND1P03886 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.08□□□□□ -0.16
MT-ND1P03886 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
MT-ND1P03886 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
MT-ND1P03886 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
MT-ND1P03886 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MT-ND1P03886 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
MT-ND1P03886 TOMM22P5-201ENST00000416399 439 ntBASIC14.08□□□□□ -0.16
MT-ND1P03886 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.08□□□□□ -0.16
MT-ND1P03886 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.08□□□□□ -0.16
MT-ND1P03886 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.08□□□□□ -0.16
MT-ND1P03886 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.08□□□□□ -0.16
MT-ND1P03886 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.08□□□□□ -0.16
MT-ND1P03886 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.08□□□□□ -0.16
MT-ND1P03886 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.08□□□□□ -0.16
MT-ND1P03886 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.08□□□□□ -0.16
MT-ND1P03886 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
MT-ND1P03886 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.08□□□□□ -0.16
MT-ND1P03886 Z92544.3-201ENST00000624747 417 ntBASIC14.08□□□□□ -0.16
MT-ND1P03886 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
MT-ND1P03886 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.08□□□□□ -0.16
MT-ND1P03886 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.08□□□□□ -0.16
MT-ND1P03886 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
MT-ND1P03886 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
MT-ND1P03886 KRT8P24-201ENST00000560290 1559 ntBASIC14.08□□□□□ -0.16
MT-ND1P03886 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MT-ND1P03886 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MT-ND1P03886 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MT-ND1P03886 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
MT-ND1P03886 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
MT-ND1P03886 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MT-ND1P03886 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
MT-ND1P03886 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
MT-ND1P03886 KRT8P22-201ENST00000562317 1415 ntBASIC14.07□□□□□ -0.16
MT-ND1P03886 AC111170.3-201ENST00000624282 2464 ntBASIC14.07□□□□□ -0.16
MT-ND1P03886 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms