Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LTAP01374 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
LTAP01374 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.61
LTAP01374 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
LTAP01374 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
LTAP01374 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
LTAP01374 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
LTAP01374 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LTAP01374 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
LTAP01374 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.61
LTAP01374 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
LTAP01374 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
LTAP01374 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
LTAP01374 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
LTAP01374 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
LTAP01374 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.61
LTAP01374 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
LTAP01374 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LTAP01374 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LTAP01374 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
LTAP01374 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
LTAP01374 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LTAP01374 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LTAP01374 MPV17-208ENST00000405076 603 ntTSL 5 BASIC11.21□□□□□ -0.61
LTAP01374 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC11.21□□□□□ -0.61
LTAP01374 RPL37AP1-201ENST00000412502 279 ntBASIC11.21□□□□□ -0.61
LTAP01374 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC11.21□□□□□ -0.61
LTAP01374 SATB1-217ENST00000493952 626 ntTSL 3 BASIC11.21□□□□□ -0.61
LTAP01374 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC11.21□□□□□ -0.61
LTAP01374 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
LTAP01374 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC11.21□□□□□ -0.61
LTAP01374 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC11.21□□□□□ -0.61
LTAP01374 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC11.21□□□□□ -0.61
LTAP01374 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC11.21□□□□□ -0.61
LTAP01374 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC11.21□□□□□ -0.61
LTAP01374 MIR6080-201ENST00000617359 66 ntBASIC11.21□□□□□ -0.61
LTAP01374 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LTAP01374 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
LTAP01374 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
LTAP01374 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC11.21□□□□□ -0.62
LTAP01374 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
LTAP01374 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
LTAP01374 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
LTAP01374 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC11.21□□□□□ -0.62
LTAP01374 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC11.21□□□□□ -0.62
LTAP01374 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.62
LTAP01374 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC11.21□□□□□ -0.62
LTAP01374 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC11.21□□□□□ -0.62
LTAP01374 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LTAP01374 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
LTAP01374 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LTAP01374 GRAMD4P3-201ENST00000621665 1669 ntBASIC11.2□□□□□ -0.62
LTAP01374 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LTAP01374 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
LTAP01374 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
LTAP01374 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC11.2□□□□□ -0.62
LTAP01374 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC11.2□□□□□ -0.62
LTAP01374 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
LTAP01374 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LTAP01374 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LTAP01374 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LTAP01374 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LTAP01374 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LTAP01374 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
LTAP01374 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LTAP01374 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LTAP01374 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
LTAP01374 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC11.2□□□□□ -0.62
LTAP01374 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LTAP01374 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LTAP01374 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LTAP01374 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LTAP01374 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC11.2□□□□□ -0.62
LTAP01374 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LTAP01374 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LTAP01374 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
LTAP01374 HAL-202ENST00000538703 2637 ntTSL 2 BASIC11.2□□□□□ -0.62
LTAP01374 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
LTAP01374 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LTAP01374 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
LTAP01374 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LTAP01374 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LTAP01374 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LTAP01374 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LTAP01374 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
LTAP01374 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LTAP01374 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LTAP01374 AL590627.1-203ENST00000421194 1026 ntBASIC11.2□□□□□ -0.62
LTAP01374 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC11.2□□□□□ -0.62
LTAP01374 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC11.2□□□□□ -0.62
LTAP01374 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC11.2□□□□□ -0.62
LTAP01374 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC11.2□□□□□ -0.62
LTAP01374 SDHAP3-202ENST00000515467 728 ntBASIC11.2□□□□□ -0.62
LTAP01374 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
LTAP01374 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC11.2□□□□□ -0.62
LTAP01374 PUS1-205ENST00000535067 838 ntTSL 3 BASIC11.2□□□□□ -0.62
LTAP01374 AL512361.1-201ENST00000554200 418 ntBASIC11.2□□□□□ -0.62
LTAP01374 AC093520.2-201ENST00000561830 333 ntBASIC11.2□□□□□ -0.62
LTAP01374 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC11.2□□□□□ -0.62
LTAP01374 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms