Protein–RNA interactions for Protein: O75439

PMPCB, Mitochondrial-processing peptidase subunit beta, humanhuman

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCBO75439 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
PMPCBO75439 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
PMPCBO75439 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
PMPCBO75439 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PMPCBO75439 AL136172.1-201ENST00000598590 1394 ntBASIC15.12■□□□□ 0.01
PMPCBO75439 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
PMPCBO75439 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PMPCBO75439 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PMPCBO75439 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PMPCBO75439 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.12■□□□□ 0.01
PMPCBO75439 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PMPCBO75439 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
PMPCBO75439 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PMPCBO75439 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PMPCBO75439 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.12■□□□□ 0.01
PMPCBO75439 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
PMPCBO75439 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PMPCBO75439 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PMPCBO75439 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PMPCBO75439 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PMPCBO75439 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PMPCBO75439 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.12■□□□□ 0.01
PMPCBO75439 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
PMPCBO75439 FAM197Y7-201ENST00000432892 766 ntBASIC15.12■□□□□ 0.01
PMPCBO75439 AC007551.1-201ENST00000457394 519 ntBASIC15.12■□□□□ 0.01
PMPCBO75439 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.12■□□□□ 0.01
PMPCBO75439 FTLP10-202ENST00000505798 471 ntBASIC15.12■□□□□ 0.01
PMPCBO75439 AL391280.1-201ENST00000506969 1062 ntBASIC15.12■□□□□ 0.01
PMPCBO75439 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.12■□□□□ 0.01
PMPCBO75439 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PMPCBO75439 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.12■□□□□ 0.01
PMPCBO75439 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PMPCBO75439 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.12■□□□□ 0.01
PMPCBO75439 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PMPCBO75439 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
PMPCBO75439 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PMPCBO75439 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.12■□□□□ 0.01
PMPCBO75439 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PMPCBO75439 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PMPCBO75439 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PMPCBO75439 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PMPCBO75439 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
PMPCBO75439 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PMPCBO75439 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PMPCBO75439 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
PMPCBO75439 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.11■□□□□ 0.01
PMPCBO75439 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PMPCBO75439 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
PMPCBO75439 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PMPCBO75439 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PMPCBO75439 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.11■□□□□ 0.01
PMPCBO75439 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PMPCBO75439 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.11■□□□□ 0.01
PMPCBO75439 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PMPCBO75439 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PMPCBO75439 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PMPCBO75439 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PMPCBO75439 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
PMPCBO75439 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.11■□□□□ 0.01
PMPCBO75439 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
PMPCBO75439 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PMPCBO75439 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.11■□□□□ 0.01
PMPCBO75439 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.11■□□□□ 0.01
PMPCBO75439 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.11■□□□□ 0.01
PMPCBO75439 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.11■□□□□ 0.01
PMPCBO75439 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.11■□□□□ 0.01
PMPCBO75439 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PMPCBO75439 RNA5SP486-201ENST00000515961 83 ntBASIC15.11■□□□□ 0.01
PMPCBO75439 CR383656.12-201ENST00000549567 513 ntBASIC15.11■□□□□ 0.01
PMPCBO75439 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15.11■□□□□ 0.01
PMPCBO75439 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.11■□□□□ 0.01
PMPCBO75439 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.11■□□□□ 0.01
PMPCBO75439 AC138696.2-201ENST00000607376 223 ntBASIC15.11■□□□□ 0.01
PMPCBO75439 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.11■□□□□ 0.01
PMPCBO75439 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.11■□□□□ 0.01
PMPCBO75439 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.11■□□□□ 0.01
PMPCBO75439 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PMPCBO75439 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
PMPCBO75439 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
PMPCBO75439 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PMPCBO75439 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PMPCBO75439 BX640514.1-201ENST00000583223 1918 ntBASIC15.11■□□□□ 0.01
PMPCBO75439 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PMPCBO75439 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PMPCBO75439 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.11■□□□□ 0.01
PMPCBO75439 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
PMPCBO75439 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PMPCBO75439 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PMPCBO75439 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PMPCBO75439 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PMPCBO75439 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PMPCBO75439 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
PMPCBO75439 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PMPCBO75439 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.1■□□□□ 0.01
PMPCBO75439 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.1■□□□□ 0.01
PMPCBO75439 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PMPCBO75439 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PMPCBO75439 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PMPCBO75439 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PMPCBO75439 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms