Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 EHD1-201ENST00000320631 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRAPPC1Q9Y5R8 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
TRAPPC1Q9Y5R8 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
TRAPPC1Q9Y5R8 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC11.27□□□□□ -0.6
TRAPPC1Q9Y5R8 AC125807.2-201ENST00000513358 3514 ntBASIC11.27□□□□□ -0.6
TRAPPC1Q9Y5R8 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
TRAPPC1Q9Y5R8 NUMA1-205ENST00000393695 7343 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
TRAPPC1Q9Y5R8 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC11.27□□□□□ -0.6
TRAPPC1Q9Y5R8 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
TRAPPC1Q9Y5R8 GATAD2A-201ENST00000358713 5510 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
TRAPPC1Q9Y5R8 FAM237B-201ENST00000637645 3877 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
TRAPPC1Q9Y5R8 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
TRAPPC1Q9Y5R8 GPR12-202ENST00000405846 4850 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
TRAPPC1Q9Y5R8 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.6
TRAPPC1Q9Y5R8 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
TRAPPC1Q9Y5R8 SYMPK-201ENST00000245934 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
TRAPPC1Q9Y5R8 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
TRAPPC1Q9Y5R8 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
TRAPPC1Q9Y5R8 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC11.27□□□□□ -0.61
TRAPPC1Q9Y5R8 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TRAPPC1Q9Y5R8 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
TRAPPC1Q9Y5R8 RPS6KC1-209ENST00000615329 4022 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
TRAPPC1Q9Y5R8 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
TRAPPC1Q9Y5R8 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC11.27□□□□□ -0.61
TRAPPC1Q9Y5R8 PCNX4-202ENST00000391611 4073 ntTSL 2 BASIC11.27□□□□□ -0.61
TRAPPC1Q9Y5R8 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
TRAPPC1Q9Y5R8 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TRAPPC1Q9Y5R8 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TRAPPC1Q9Y5R8 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
TRAPPC1Q9Y5R8 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
TRAPPC1Q9Y5R8 MIR718-201ENST00000390190 70 ntBASIC11.27□□□□□ -0.61
TRAPPC1Q9Y5R8 AC005521.1-201ENST00000393351 872 ntBASIC11.27□□□□□ -0.61
TRAPPC1Q9Y5R8 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC11.27□□□□□ -0.61
TRAPPC1Q9Y5R8 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC11.27□□□□□ -0.61
TRAPPC1Q9Y5R8 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC11.27□□□□□ -0.61
TRAPPC1Q9Y5R8 BX664615.1-201ENST00000443558 458 ntBASIC11.27□□□□□ -0.61
TRAPPC1Q9Y5R8 KRT17P6-201ENST00000453795 1220 ntBASIC11.27□□□□□ -0.61
TRAPPC1Q9Y5R8 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
TRAPPC1Q9Y5R8 EMC9-206ENST00000560403 872 ntTSL 2 BASIC11.27□□□□□ -0.61
TRAPPC1Q9Y5R8 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC11.27□□□□□ -0.61
TRAPPC1Q9Y5R8 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC11.27□□□□□ -0.61
TRAPPC1Q9Y5R8 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TRAPPC1Q9Y5R8 MIR4651-201ENST00000582622 73 ntBASIC11.27□□□□□ -0.61
TRAPPC1Q9Y5R8 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC11.27□□□□□ -0.61
TRAPPC1Q9Y5R8 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC11.27□□□□□ -0.61
TRAPPC1Q9Y5R8 AL139288.1-201ENST00000623748 933 ntBASIC11.27□□□□□ -0.61
TRAPPC1Q9Y5R8 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
TRAPPC1Q9Y5R8 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
TRAPPC1Q9Y5R8 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC11.27□□□□□ -0.61
TRAPPC1Q9Y5R8 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
TRAPPC1Q9Y5R8 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
TRAPPC1Q9Y5R8 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC11.27□□□□□ -0.61
TRAPPC1Q9Y5R8 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC11.27□□□□□ -0.61
TRAPPC1Q9Y5R8 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC11.27□□□□□ -0.61
TRAPPC1Q9Y5R8 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
TRAPPC1Q9Y5R8 REST-208ENST00000619101 7114 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TRAPPC1Q9Y5R8 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC11.27□□□□□ -0.61
TRAPPC1Q9Y5R8 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
TRAPPC1Q9Y5R8 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC11.27□□□□□ -0.61
TRAPPC1Q9Y5R8 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TRAPPC1Q9Y5R8 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TRAPPC1Q9Y5R8 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TRAPPC1Q9Y5R8 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC11.27□□□□□ -0.61
TRAPPC1Q9Y5R8 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TRAPPC1Q9Y5R8 MYO1D-202ENST00000394649 5451 ntTSL 5 BASIC11.27□□□□□ -0.61
TRAPPC1Q9Y5R8 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TRAPPC1Q9Y5R8 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TRAPPC1Q9Y5R8 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
TRAPPC1Q9Y5R8 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
TRAPPC1Q9Y5R8 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
TRAPPC1Q9Y5R8 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TRAPPC1Q9Y5R8 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
TRAPPC1Q9Y5R8 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
TRAPPC1Q9Y5R8 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TRAPPC1Q9Y5R8 AC015712.2-201ENST00000560351 3688 ntTSL 2 BASIC11.27□□□□□ -0.61
TRAPPC1Q9Y5R8 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC11.26□□□□□ -0.61
TRAPPC1Q9Y5R8 NPTN-IT1-201ENST00000628401 2283 ntBASIC11.26□□□□□ -0.61
TRAPPC1Q9Y5R8 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TRAPPC1Q9Y5R8 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TRAPPC1Q9Y5R8 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TRAPPC1Q9Y5R8 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
TRAPPC1Q9Y5R8 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TRAPPC1Q9Y5R8 AC027369.3-201ENST00000530465 3707 ntBASIC11.26□□□□□ -0.61
TRAPPC1Q9Y5R8 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TRAPPC1Q9Y5R8 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC11.26□□□□□ -0.61
TRAPPC1Q9Y5R8 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TRAPPC1Q9Y5R8 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TRAPPC1Q9Y5R8 CAMK2A-201ENST00000348628 5322 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TRAPPC1Q9Y5R8 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC11.26□□□□□ -0.61
TRAPPC1Q9Y5R8 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TRAPPC1Q9Y5R8 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
TRAPPC1Q9Y5R8 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TRAPPC1Q9Y5R8 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC11.26□□□□□ -0.61
TRAPPC1Q9Y5R8 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TRAPPC1Q9Y5R8 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
TRAPPC1Q9Y5R8 OR2V2-202ENST00000641492 4777 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
TRAPPC1Q9Y5R8 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC11.26□□□□□ -0.61
TRAPPC1Q9Y5R8 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TRAPPC1Q9Y5R8 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TRAPPC1Q9Y5R8 AC136604.1-202ENST00000425471 771 ntBASIC11.26□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms