Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 MIR6074-201ENST00000612054 107 ntBASIC16.44■□□□□ 0.22
BLOC1S4Q9NUP1 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC16.44■□□□□ 0.22
BLOC1S4Q9NUP1 AL136301.1-201ENST00000615830 422 ntBASIC16.44■□□□□ 0.22
BLOC1S4Q9NUP1 COX11-210ENST00000639671 696 ntBASIC16.44■□□□□ 0.22
BLOC1S4Q9NUP1 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
BLOC1S4Q9NUP1 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
BLOC1S4Q9NUP1 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC16.44■□□□□ 0.22
BLOC1S4Q9NUP1 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
BLOC1S4Q9NUP1 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
BLOC1S4Q9NUP1 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
BLOC1S4Q9NUP1 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC16.44■□□□□ 0.22
BLOC1S4Q9NUP1 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
BLOC1S4Q9NUP1 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
BLOC1S4Q9NUP1 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
BLOC1S4Q9NUP1 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
BLOC1S4Q9NUP1 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
BLOC1S4Q9NUP1 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC16.44■□□□□ 0.22
BLOC1S4Q9NUP1 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
BLOC1S4Q9NUP1 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC16.43■□□□□ 0.22
BLOC1S4Q9NUP1 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
BLOC1S4Q9NUP1 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
BLOC1S4Q9NUP1 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
BLOC1S4Q9NUP1 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
BLOC1S4Q9NUP1 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
BLOC1S4Q9NUP1 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC16.43■□□□□ 0.22
BLOC1S4Q9NUP1 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
BLOC1S4Q9NUP1 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
BLOC1S4Q9NUP1 USP4-203ENST00000415188 1454 ntTSL 3 BASIC16.43■□□□□ 0.22
BLOC1S4Q9NUP1 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC16.43■□□□□ 0.22
BLOC1S4Q9NUP1 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
BLOC1S4Q9NUP1 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
BLOC1S4Q9NUP1 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
BLOC1S4Q9NUP1 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC16.43■□□□□ 0.22
BLOC1S4Q9NUP1 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
BLOC1S4Q9NUP1 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
BLOC1S4Q9NUP1 MIR326-201ENST00000362220 95 ntBASIC16.43■□□□□ 0.22
BLOC1S4Q9NUP1 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
BLOC1S4Q9NUP1 STX1A-203ENST00000395155 783 ntTSL 2 BASIC16.43■□□□□ 0.22
BLOC1S4Q9NUP1 OLR1-203ENST00000432556 950 ntTSL 2 BASIC16.43■□□□□ 0.22
BLOC1S4Q9NUP1 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
BLOC1S4Q9NUP1 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC16.43■□□□□ 0.22
BLOC1S4Q9NUP1 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC16.43■□□□□ 0.22
BLOC1S4Q9NUP1 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC16.43■□□□□ 0.22
BLOC1S4Q9NUP1 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
BLOC1S4Q9NUP1 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC16.43■□□□□ 0.22
BLOC1S4Q9NUP1 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC16.43■□□□□ 0.22
BLOC1S4Q9NUP1 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC16.43■□□□□ 0.22
BLOC1S4Q9NUP1 SORD2P-201ENST00000558556 1069 ntBASIC16.43■□□□□ 0.22
BLOC1S4Q9NUP1 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC16.43■□□□□ 0.22
BLOC1S4Q9NUP1 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC16.43■□□□□ 0.22
BLOC1S4Q9NUP1 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
BLOC1S4Q9NUP1 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
BLOC1S4Q9NUP1 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
BLOC1S4Q9NUP1 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC16.43■□□□□ 0.22
BLOC1S4Q9NUP1 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
BLOC1S4Q9NUP1 E2F3P2-201ENST00000447755 1422 ntBASIC16.43■□□□□ 0.22
BLOC1S4Q9NUP1 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
BLOC1S4Q9NUP1 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
BLOC1S4Q9NUP1 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
BLOC1S4Q9NUP1 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
BLOC1S4Q9NUP1 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.43■□□□□ 0.22
BLOC1S4Q9NUP1 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC16.42■□□□□ 0.22
BLOC1S4Q9NUP1 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC16.42■□□□□ 0.22
BLOC1S4Q9NUP1 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
BLOC1S4Q9NUP1 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
BLOC1S4Q9NUP1 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.42■□□□□ 0.22
BLOC1S4Q9NUP1 ABR-228ENST00000574437 3196 ntTSL 5 BASIC16.42■□□□□ 0.22
BLOC1S4Q9NUP1 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
BLOC1S4Q9NUP1 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
BLOC1S4Q9NUP1 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
BLOC1S4Q9NUP1 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
BLOC1S4Q9NUP1 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC16.42■□□□□ 0.22
BLOC1S4Q9NUP1 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC16.42■□□□□ 0.22
BLOC1S4Q9NUP1 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
BLOC1S4Q9NUP1 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
BLOC1S4Q9NUP1 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC16.42■□□□□ 0.22
BLOC1S4Q9NUP1 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC16.42■□□□□ 0.22
BLOC1S4Q9NUP1 AP005482.1-201ENST00000563722 1273 ntBASIC16.42■□□□□ 0.22
BLOC1S4Q9NUP1 DUX4L45-201ENST00000566406 1057 ntBASIC16.42■□□□□ 0.22
BLOC1S4Q9NUP1 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
BLOC1S4Q9NUP1 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
BLOC1S4Q9NUP1 AC027601.3-201ENST00000622907 509 ntBASIC16.42■□□□□ 0.22
BLOC1S4Q9NUP1 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
BLOC1S4Q9NUP1 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
BLOC1S4Q9NUP1 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
BLOC1S4Q9NUP1 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
BLOC1S4Q9NUP1 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
BLOC1S4Q9NUP1 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
BLOC1S4Q9NUP1 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
BLOC1S4Q9NUP1 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
BLOC1S4Q9NUP1 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
BLOC1S4Q9NUP1 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
BLOC1S4Q9NUP1 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC16.42■□□□□ 0.22
BLOC1S4Q9NUP1 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC16.42■□□□□ 0.22
BLOC1S4Q9NUP1 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
BLOC1S4Q9NUP1 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
BLOC1S4Q9NUP1 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
BLOC1S4Q9NUP1 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BLOC1S4Q9NUP1 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BLOC1S4Q9NUP1 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms