Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
BRF2Q9HAW0 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
BRF2Q9HAW0 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BRF2Q9HAW0 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.2□□□□□ -0.14
BRF2Q9HAW0 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
BRF2Q9HAW0 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
BRF2Q9HAW0 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
BRF2Q9HAW0 RN7SKP175-201ENST00000408472 289 ntBASIC14.2□□□□□ -0.14
BRF2Q9HAW0 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.2□□□□□ -0.14
BRF2Q9HAW0 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
BRF2Q9HAW0 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.2□□□□□ -0.14
BRF2Q9HAW0 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.2□□□□□ -0.14
BRF2Q9HAW0 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC14.2□□□□□ -0.14
BRF2Q9HAW0 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
BRF2Q9HAW0 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.2□□□□□ -0.14
BRF2Q9HAW0 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC14.2□□□□□ -0.14
BRF2Q9HAW0 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.2□□□□□ -0.14
BRF2Q9HAW0 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.2□□□□□ -0.14
BRF2Q9HAW0 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC14.2□□□□□ -0.14
BRF2Q9HAW0 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.2□□□□□ -0.14
BRF2Q9HAW0 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.2□□□□□ -0.14
BRF2Q9HAW0 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
BRF2Q9HAW0 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.2□□□□□ -0.14
BRF2Q9HAW0 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.2□□□□□ -0.14
BRF2Q9HAW0 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BRF2Q9HAW0 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BRF2Q9HAW0 AL590440.2-201ENST00000641973 1595 ntBASIC14.2□□□□□ -0.14
BRF2Q9HAW0 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
BRF2Q9HAW0 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.2□□□□□ -0.14
BRF2Q9HAW0 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
BRF2Q9HAW0 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.2□□□□□ -0.14
BRF2Q9HAW0 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BRF2Q9HAW0 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BRF2Q9HAW0 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
BRF2Q9HAW0 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
BRF2Q9HAW0 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BRF2Q9HAW0 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
BRF2Q9HAW0 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
BRF2Q9HAW0 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.2□□□□□ -0.14
BRF2Q9HAW0 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
BRF2Q9HAW0 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
BRF2Q9HAW0 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
BRF2Q9HAW0 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.2□□□□□ -0.14
BRF2Q9HAW0 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.19□□□□□ -0.14
BRF2Q9HAW0 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
BRF2Q9HAW0 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
BRF2Q9HAW0 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
BRF2Q9HAW0 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
BRF2Q9HAW0 KHSRPP1-201ENST00000427983 1768 ntBASIC14.19□□□□□ -0.14
BRF2Q9HAW0 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
BRF2Q9HAW0 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.19□□□□□ -0.14
BRF2Q9HAW0 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
BRF2Q9HAW0 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
BRF2Q9HAW0 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
BRF2Q9HAW0 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.19□□□□□ -0.14
BRF2Q9HAW0 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.19□□□□□ -0.14
BRF2Q9HAW0 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
BRF2Q9HAW0 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.19□□□□□ -0.14
BRF2Q9HAW0 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
BRF2Q9HAW0 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
BRF2Q9HAW0 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
BRF2Q9HAW0 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.19□□□□□ -0.14
BRF2Q9HAW0 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
BRF2Q9HAW0 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
BRF2Q9HAW0 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.19□□□□□ -0.14
BRF2Q9HAW0 C2orf27AP3-201ENST00000434123 579 ntBASIC14.19□□□□□ -0.14
BRF2Q9HAW0 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
BRF2Q9HAW0 PUDPP3-201ENST00000445368 636 ntBASIC14.19□□□□□ -0.14
BRF2Q9HAW0 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.19□□□□□ -0.14
BRF2Q9HAW0 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
BRF2Q9HAW0 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
BRF2Q9HAW0 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.19□□□□□ -0.14
BRF2Q9HAW0 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.19□□□□□ -0.14
BRF2Q9HAW0 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.19□□□□□ -0.14
BRF2Q9HAW0 AL391280.1-201ENST00000506969 1062 ntBASIC14.19□□□□□ -0.14
BRF2Q9HAW0 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
BRF2Q9HAW0 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.19□□□□□ -0.14
BRF2Q9HAW0 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.19□□□□□ -0.14
BRF2Q9HAW0 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC14.19□□□□□ -0.14
BRF2Q9HAW0 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.19□□□□□ -0.14
BRF2Q9HAW0 AC106820.3-201ENST00000561653 397 ntBASIC14.19□□□□□ -0.14
BRF2Q9HAW0 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.19□□□□□ -0.14
BRF2Q9HAW0 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.19□□□□□ -0.14
BRF2Q9HAW0 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.19□□□□□ -0.14
BRF2Q9HAW0 AL354718.3-201ENST00000616414 581 ntBASIC14.19□□□□□ -0.14
BRF2Q9HAW0 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
BRF2Q9HAW0 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
BRF2Q9HAW0 CR382287.1-201ENST00000623954 586 ntBASIC14.19□□□□□ -0.14
BRF2Q9HAW0 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.19□□□□□ -0.14
BRF2Q9HAW0 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
BRF2Q9HAW0 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.19□□□□□ -0.14
BRF2Q9HAW0 AC215219.1-201ENST00000400706 1817 ntBASIC14.19□□□□□ -0.14
BRF2Q9HAW0 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.19□□□□□ -0.14
BRF2Q9HAW0 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
BRF2Q9HAW0 AC067750.1-201ENST00000608826 6545 ntBASIC14.19□□□□□ -0.14
BRF2Q9HAW0 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
BRF2Q9HAW0 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.19□□□□□ -0.14
BRF2Q9HAW0 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.19□□□□□ -0.14
BRF2Q9HAW0 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
BRF2Q9HAW0 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms