Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
VGLL1Q99990 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC11.35□□□□□ -0.59
VGLL1Q99990 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
VGLL1Q99990 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
VGLL1Q99990 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
VGLL1Q99990 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
VGLL1Q99990 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC11.35□□□□□ -0.59
VGLL1Q99990 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC11.35□□□□□ -0.59
VGLL1Q99990 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC11.35□□□□□ -0.59
VGLL1Q99990 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
VGLL1Q99990 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC11.35□□□□□ -0.59
VGLL1Q99990 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
VGLL1Q99990 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
VGLL1Q99990 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
VGLL1Q99990 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
VGLL1Q99990 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
VGLL1Q99990 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
VGLL1Q99990 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
VGLL1Q99990 WRB-204ENST00000398753 699 ntTSL 3 BASIC11.35□□□□□ -0.59
VGLL1Q99990 MIR1233-2-201ENST00000408138 82 ntBASIC11.35□□□□□ -0.59
VGLL1Q99990 MIR1233-1-201ENST00000408722 82 ntBASIC11.35□□□□□ -0.59
VGLL1Q99990 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC11.35□□□□□ -0.59
VGLL1Q99990 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC11.35□□□□□ -0.59
VGLL1Q99990 HLA-K-203ENST00000430151 1046 ntBASIC11.35□□□□□ -0.59
VGLL1Q99990 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC11.35□□□□□ -0.59
VGLL1Q99990 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC11.35□□□□□ -0.59
VGLL1Q99990 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC11.35□□□□□ -0.59
VGLL1Q99990 SLBP-205ENST00000488267 987 ntTSL 2 BASIC11.35□□□□□ -0.59
VGLL1Q99990 GAPDHP40-201ENST00000505218 1006 ntBASIC11.35□□□□□ -0.59
VGLL1Q99990 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC11.35□□□□□ -0.59
VGLL1Q99990 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
VGLL1Q99990 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC11.35□□□□□ -0.59
VGLL1Q99990 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC11.35□□□□□ -0.59
VGLL1Q99990 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC11.35□□□□□ -0.59
VGLL1Q99990 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC11.35□□□□□ -0.59
VGLL1Q99990 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC11.35□□□□□ -0.59
VGLL1Q99990 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC11.35□□□□□ -0.59
VGLL1Q99990 AL844908.2-201ENST00000609461 460 ntBASIC11.35□□□□□ -0.59
VGLL1Q99990 5S_rRNA.22-201ENST00000614916 106 ntBASIC11.35□□□□□ -0.59
VGLL1Q99990 AL158212.4-201ENST00000624062 1286 ntBASIC11.35□□□□□ -0.59
VGLL1Q99990 USP4-203ENST00000415188 1454 ntTSL 3 BASIC11.35□□□□□ -0.59
VGLL1Q99990 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC11.35□□□□□ -0.59
VGLL1Q99990 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
VGLL1Q99990 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
VGLL1Q99990 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC11.35□□□□□ -0.59
VGLL1Q99990 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC11.35□□□□□ -0.59
VGLL1Q99990 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
VGLL1Q99990 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
VGLL1Q99990 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
VGLL1Q99990 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
VGLL1Q99990 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
VGLL1Q99990 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
VGLL1Q99990 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC11.35□□□□□ -0.59
VGLL1Q99990 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
VGLL1Q99990 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC11.35□□□□□ -0.59
VGLL1Q99990 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
VGLL1Q99990 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
VGLL1Q99990 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
VGLL1Q99990 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
VGLL1Q99990 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
VGLL1Q99990 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
VGLL1Q99990 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
VGLL1Q99990 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
VGLL1Q99990 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
VGLL1Q99990 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
VGLL1Q99990 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC11.35□□□□□ -0.59
VGLL1Q99990 AL158070.2-201ENST00000623713 1621 ntBASIC11.35□□□□□ -0.59
VGLL1Q99990 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
VGLL1Q99990 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC11.35□□□□□ -0.59
VGLL1Q99990 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC11.34□□□□□ -0.59
VGLL1Q99990 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
VGLL1Q99990 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
VGLL1Q99990 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC11.34□□□□□ -0.59
VGLL1Q99990 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
VGLL1Q99990 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
VGLL1Q99990 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC11.34□□□□□ -0.59
VGLL1Q99990 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC11.34□□□□□ -0.59
VGLL1Q99990 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
VGLL1Q99990 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
VGLL1Q99990 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
VGLL1Q99990 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
VGLL1Q99990 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
VGLL1Q99990 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
VGLL1Q99990 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
VGLL1Q99990 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
VGLL1Q99990 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
VGLL1Q99990 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
VGLL1Q99990 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC11.34□□□□□ -0.59
VGLL1Q99990 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
VGLL1Q99990 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
VGLL1Q99990 AL139400.1-201ENST00000366220 510 ntBASIC11.34□□□□□ -0.59
VGLL1Q99990 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
VGLL1Q99990 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
VGLL1Q99990 BAD-202ENST00000394531 631 ntTSL 3 BASIC11.34□□□□□ -0.59
VGLL1Q99990 HNRNPA3P1-201ENST00000401429 1139 ntBASIC11.34□□□□□ -0.59
VGLL1Q99990 TSEN15P1-201ENST00000423257 515 ntBASIC11.34□□□□□ -0.59
VGLL1Q99990 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC11.34□□□□□ -0.59
VGLL1Q99990 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC11.34□□□□□ -0.59
VGLL1Q99990 KLF2P3-201ENST00000451977 1087 ntBASIC11.34□□□□□ -0.59
VGLL1Q99990 HNRNPA3P5-201ENST00000455201 833 ntBASIC11.34□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms