Protein–RNA interactions for Protein: Q96LR5

UBE2E2, Ubiquitin-conjugating enzyme E2 E2, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E2Q96LR5 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
UBE2E2Q96LR5 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
UBE2E2Q96LR5 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
UBE2E2Q96LR5 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
UBE2E2Q96LR5 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
UBE2E2Q96LR5 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
UBE2E2Q96LR5 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
UBE2E2Q96LR5 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
UBE2E2Q96LR5 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC11.52□□□□□ -0.57
UBE2E2Q96LR5 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
UBE2E2Q96LR5 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
UBE2E2Q96LR5 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
UBE2E2Q96LR5 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
UBE2E2Q96LR5 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
UBE2E2Q96LR5 RBM38-204ENST00000371219 760 ntTSL 2 BASIC11.52□□□□□ -0.57
UBE2E2Q96LR5 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
UBE2E2Q96LR5 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC11.52□□□□□ -0.57
UBE2E2Q96LR5 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC11.52□□□□□ -0.57
UBE2E2Q96LR5 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC11.52□□□□□ -0.57
UBE2E2Q96LR5 AC010141.1-201ENST00000411585 623 ntBASIC11.52□□□□□ -0.57
UBE2E2Q96LR5 AL354877.1-201ENST00000424412 413 ntBASIC11.52□□□□□ -0.57
UBE2E2Q96LR5 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC11.52□□□□□ -0.57
UBE2E2Q96LR5 PTPA-218ENST00000435132 618 ntTSL 2 BASIC11.52□□□□□ -0.57
UBE2E2Q96LR5 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC11.52□□□□□ -0.57
UBE2E2Q96LR5 AL035414.1-201ENST00000451327 857 ntBASIC11.52□□□□□ -0.57
UBE2E2Q96LR5 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC11.52□□□□□ -0.57
UBE2E2Q96LR5 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
UBE2E2Q96LR5 AC108725.1-201ENST00000495472 409 ntBASIC11.52□□□□□ -0.57
UBE2E2Q96LR5 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC11.52□□□□□ -0.57
UBE2E2Q96LR5 AC100850.1-201ENST00000506768 649 ntBASIC11.52□□□□□ -0.57
UBE2E2Q96LR5 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC11.52□□□□□ -0.57
UBE2E2Q96LR5 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC11.52□□□□□ -0.57
UBE2E2Q96LR5 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC11.52□□□□□ -0.57
UBE2E2Q96LR5 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC11.52□□□□□ -0.57
UBE2E2Q96LR5 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
UBE2E2Q96LR5 AL022328.3-201ENST00000607943 679 ntBASIC11.52□□□□□ -0.57
UBE2E2Q96LR5 AL096828.3-201ENST00000615354 462 ntBASIC11.52□□□□□ -0.57
UBE2E2Q96LR5 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC11.52□□□□□ -0.57
UBE2E2Q96LR5 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
UBE2E2Q96LR5 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
UBE2E2Q96LR5 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
UBE2E2Q96LR5 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC11.52□□□□□ -0.57
UBE2E2Q96LR5 LINC00554-201ENST00000564841 3011 ntBASIC11.52□□□□□ -0.57
UBE2E2Q96LR5 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
UBE2E2Q96LR5 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
UBE2E2Q96LR5 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC11.52□□□□□ -0.57
UBE2E2Q96LR5 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
UBE2E2Q96LR5 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
UBE2E2Q96LR5 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
UBE2E2Q96LR5 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
UBE2E2Q96LR5 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
UBE2E2Q96LR5 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC11.52□□□□□ -0.57
UBE2E2Q96LR5 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
UBE2E2Q96LR5 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC11.52□□□□□ -0.57
UBE2E2Q96LR5 AC009093.2-202ENST00000620513 2079 ntBASIC11.51□□□□□ -0.57
UBE2E2Q96LR5 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC11.51□□□□□ -0.57
UBE2E2Q96LR5 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
UBE2E2Q96LR5 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
UBE2E2Q96LR5 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
UBE2E2Q96LR5 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC11.51□□□□□ -0.57
UBE2E2Q96LR5 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
UBE2E2Q96LR5 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC11.51□□□□□ -0.57
UBE2E2Q96LR5 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
UBE2E2Q96LR5 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
UBE2E2Q96LR5 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC11.51□□□□□ -0.57
UBE2E2Q96LR5 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC11.51□□□□□ -0.57
UBE2E2Q96LR5 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
UBE2E2Q96LR5 AC046158.3-201ENST00000624947 2558 ntBASIC11.51□□□□□ -0.57
UBE2E2Q96LR5 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
UBE2E2Q96LR5 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC11.51□□□□□ -0.57
UBE2E2Q96LR5 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC11.51□□□□□ -0.57
UBE2E2Q96LR5 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
UBE2E2Q96LR5 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
UBE2E2Q96LR5 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
UBE2E2Q96LR5 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
UBE2E2Q96LR5 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
UBE2E2Q96LR5 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC11.51□□□□□ -0.57
UBE2E2Q96LR5 PUDPP3-201ENST00000445368 636 ntBASIC11.51□□□□□ -0.57
UBE2E2Q96LR5 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
UBE2E2Q96LR5 PACS1-203ENST00000524815 628 ntTSL 4 BASIC11.51□□□□□ -0.57
UBE2E2Q96LR5 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
UBE2E2Q96LR5 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC11.51□□□□□ -0.57
UBE2E2Q96LR5 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
UBE2E2Q96LR5 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC11.51□□□□□ -0.57
UBE2E2Q96LR5 RNF41-210ENST00000552244 716 ntTSL 3 BASIC11.51□□□□□ -0.57
UBE2E2Q96LR5 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC11.51□□□□□ -0.57
UBE2E2Q96LR5 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC11.51□□□□□ -0.57
UBE2E2Q96LR5 DUX4L46-201ENST00000566845 751 ntBASIC11.51□□□□□ -0.57
UBE2E2Q96LR5 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC11.51□□□□□ -0.57
UBE2E2Q96LR5 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC11.51□□□□□ -0.57
UBE2E2Q96LR5 MIR4538-201ENST00000581377 78 ntBASIC11.51□□□□□ -0.57
UBE2E2Q96LR5 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC11.51□□□□□ -0.57
UBE2E2Q96LR5 AC005695.3-201ENST00000614522 232 ntBASIC11.51□□□□□ -0.57
UBE2E2Q96LR5 AL023803.2-201ENST00000620080 638 ntBASIC11.51□□□□□ -0.57
UBE2E2Q96LR5 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
UBE2E2Q96LR5 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
UBE2E2Q96LR5 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
UBE2E2Q96LR5 AC006058.4-201ENST00000624016 1670 ntBASIC11.51□□□□□ -0.57
UBE2E2Q96LR5 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC11.51□□□□□ -0.57
UBE2E2Q96LR5 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms