Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC17.67■□□□□ 0.42
SNED1Q8TER0 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SNED1Q8TER0 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.67■□□□□ 0.42
SNED1Q8TER0 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SNED1Q8TER0 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.67■□□□□ 0.42
SNED1Q8TER0 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC17.67■□□□□ 0.42
SNED1Q8TER0 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNED1Q8TER0 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNED1Q8TER0 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC17.67■□□□□ 0.42
SNED1Q8TER0 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC17.67■□□□□ 0.42
SNED1Q8TER0 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC17.67■□□□□ 0.42
SNED1Q8TER0 KRT17P4-201ENST00000429445 819 ntBASIC17.67■□□□□ 0.42
SNED1Q8TER0 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SNED1Q8TER0 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SNED1Q8TER0 OR5BD1P-201ENST00000532527 817 ntBASIC17.67■□□□□ 0.42
SNED1Q8TER0 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC17.67■□□□□ 0.42
SNED1Q8TER0 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC17.67■□□□□ 0.42
SNED1Q8TER0 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNED1Q8TER0 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SNED1Q8TER0 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.67■□□□□ 0.42
SNED1Q8TER0 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNED1Q8TER0 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SNED1Q8TER0 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNED1Q8TER0 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SNED1Q8TER0 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNED1Q8TER0 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SNED1Q8TER0 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.67■□□□□ 0.42
SNED1Q8TER0 HCG11-201ENST00000411553 5696 ntBASIC17.67■□□□□ 0.42
SNED1Q8TER0 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNED1Q8TER0 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SNED1Q8TER0 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SNED1Q8TER0 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNED1Q8TER0 ACE3P-201ENST00000423435 1973 ntBASIC17.66■□□□□ 0.42
SNED1Q8TER0 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.66■□□□□ 0.42
SNED1Q8TER0 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
SNED1Q8TER0 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC17.66■□□□□ 0.42
SNED1Q8TER0 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
SNED1Q8TER0 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNED1Q8TER0 RNVU1-8-201ENST00000364272 125 ntBASIC17.66■□□□□ 0.42
SNED1Q8TER0 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SNED1Q8TER0 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SNED1Q8TER0 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC17.66■□□□□ 0.42
SNED1Q8TER0 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNED1Q8TER0 PPP1R2P4-201ENST00000424051 595 ntBASIC17.66■□□□□ 0.42
SNED1Q8TER0 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC17.66■□□□□ 0.42
SNED1Q8TER0 AC106047.2-201ENST00000511723 743 ntBASIC17.66■□□□□ 0.42
SNED1Q8TER0 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC17.66■□□□□ 0.42
SNED1Q8TER0 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC17.66■□□□□ 0.42
SNED1Q8TER0 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC17.66■□□□□ 0.42
SNED1Q8TER0 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC17.66■□□□□ 0.42
SNED1Q8TER0 HELLS-212ENST00000630929 400 ntTSL 5 BASIC17.66■□□□□ 0.42
SNED1Q8TER0 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNED1Q8TER0 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNED1Q8TER0 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SNED1Q8TER0 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.66■□□□□ 0.42
SNED1Q8TER0 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNED1Q8TER0 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC17.66■□□□□ 0.42
SNED1Q8TER0 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC17.66■□□□□ 0.42
SNED1Q8TER0 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNED1Q8TER0 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC17.66■□□□□ 0.42
SNED1Q8TER0 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNED1Q8TER0 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNED1Q8TER0 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNED1Q8TER0 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNED1Q8TER0 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNED1Q8TER0 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNED1Q8TER0 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNED1Q8TER0 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC17.66■□□□□ 0.42
SNED1Q8TER0 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SNED1Q8TER0 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNED1Q8TER0 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNED1Q8TER0 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
SNED1Q8TER0 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SNED1Q8TER0 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNED1Q8TER0 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SNED1Q8TER0 AC006486.2-201ENST00000624246 2199 ntBASIC17.65■□□□□ 0.42
SNED1Q8TER0 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SNED1Q8TER0 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNED1Q8TER0 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC17.65■□□□□ 0.42
SNED1Q8TER0 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNED1Q8TER0 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC17.65■□□□□ 0.42
SNED1Q8TER0 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC17.65■□□□□ 0.42
SNED1Q8TER0 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
SNED1Q8TER0 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC17.65■□□□□ 0.42
SNED1Q8TER0 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC17.65■□□□□ 0.42
SNED1Q8TER0 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC17.65■□□□□ 0.42
SNED1Q8TER0 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
SNED1Q8TER0 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC17.65■□□□□ 0.42
SNED1Q8TER0 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC17.65■□□□□ 0.42
SNED1Q8TER0 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
SNED1Q8TER0 AC055811.3-201ENST00000584952 686 ntBASIC17.65■□□□□ 0.42
SNED1Q8TER0 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC17.65■□□□□ 0.42
SNED1Q8TER0 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC17.65■□□□□ 0.42
SNED1Q8TER0 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC17.65■□□□□ 0.42
SNED1Q8TER0 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.65■□□□□ 0.42
SNED1Q8TER0 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SNED1Q8TER0 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNED1Q8TER0 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
SNED1Q8TER0 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNED1Q8TER0 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms